Basic Information

Symbol
circPAIP2
RNA Class
circRNA
Alias
Poly(A) Binding Protein Interacting Protein 2 PAIP2A PABP-Interacting Protein 2 Polyadenylate-Binding Protein-Interacting Protein 2 PAIP-2 Poly(A)-Binding Protein-Interacting Protein 2 PolyA-Binding Protein-Interacting Protein 2 PABC1-Interacting Protein 2
Location (GRCh37)
5:138660790-138705337 UCSC Genome Browser
Location (GRCh38)
5:139325101-139369648
UCSC Genome Browser Search in Marker Scope
Host gene
PAIP2
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_chr5_0159700 Intergenic-Intergenic chr5:138683643-138684294 chr5:139347954-139348605 652 nt 0.4847
hsa_chr5_0159800 Intergenic-Intergenic chr5:138685020-138693435 chr5:139349331-139357746 250 nt 0.3960
hsa_PAIP2_0001000 Intron-Intron chr5:138685149-138685465 chr5:139349460-139349776 317 nt 0.3880
hsa_PAIP2_0001100 Intron-Intron chr5:138688232-138688742 chr5:139352543-139353053 511 nt 0.5421
hsa_PAIP2_0001200 Intron-Intron chr5:138688239-138688742 chr5:139352550-139353053 504 nt 0.5397
hsa_PAIP2_0001300 Intron-Intron chr5:138688396-138688547 chr5:139352707-139352858 152 nt 0.5395
hsa_PAIP2_0001400 Intron-Exon chr5:138689428-138700432 chr5:139353739-139364743 250 nt 0.4200
hsa_PAIP2_0001500 Intron-Exon chr5:138689891-138700432 chr5:139354202-139364743 250 nt 0.3160
hsa_PAIP2_0001600 Intron-Exon chr5:138690018-138700432 chr5:139354329-139364743 209 nt 0.3923
hsa_PAIP2_0001700 Intron-Intron chr5:138692506-138695711 chr5:139356817-139360022 250 nt 0.3360
Showing 11 to 20 of 33 entries
Forensic Context

A review consolidating research across multiple species including human, mouse, and rat indicates that the circPAIP2, a nuclear exon-intron circRNA, enhances transcription of its parental PAIP2 gene in a positive feedback loop by interacting with U1 snRNP complexes and RNA polymerase II [Chan et al. DOI:10.016/j.tibs.2018.09.016].