Basic Information

Symbol
circPAIP2
RNA Class
circRNA
Alias
Poly(A) Binding Protein Interacting Protein 2 PAIP2A PABP-Interacting Protein 2 Polyadenylate-Binding Protein-Interacting Protein 2 PAIP-2 Poly(A)-Binding Protein-Interacting Protein 2 PolyA-Binding Protein-Interacting Protein 2 PABC1-Interacting Protein 2
Location (GRCh37)
5:138660790-138705337 UCSC Genome Browser
Location (GRCh38)
5:139325101-139369648
UCSC Genome Browser Search in Marker Scope
Host gene
PAIP2
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_PAIP2_0001800 Intron-Exon chr5:138695677-138700432 chr5:139359988-139364743 466 nt 0.4506
hsa_PAIP2_0001900 Intron-Intron chr5:138697543-138698194 chr5:139361854-139362505 652 nt 0.4433
hsa_PAIP2_0002000 Intron-Exon chr5:138698145-138700432 chr5:139362456-139364743 1647 nt 0.4572
hsa_PAIP2_0002300 Exon-Exon chr5:138699448-138700439 chr5:139363759-139364750 351 nt 0.3960
hsa_PAIP2_0002400 Exon-Exon chr5:138699448-138700774 chr5:139363759-139365085 686 nt 0.4402
hsa_PAIP2_0002500 Exon-Exon chr5:138699448-138704466 chr5:139363759-139368777 225 nt 0.4178
hsa_PAIP2_0002600 Exon-Exon chr5:138699448-138704471 chr5:139363759-139368782 56 nt 0.4107
hsa_PAIP2_0002700 Exon-Exon chr5:138699481-138704924 chr5:139363792-139369235 814 nt 0.3784
hsa_PAIP2_0002800 Exon-Exon chr5:138700385-138705298 chr5:139364696-139369609 48 nt 0.3958
hsa_PAIP2_0003300 Exon-Exon chr5:138704422-138704731 chr5:139368733-139369042 310 nt 0.4000
Showing 21 to 30 of 33 entries
Forensic Context

A review consolidating research across multiple species including human, mouse, and rat indicates that the circPAIP2, a nuclear exon-intron circRNA, enhances transcription of its parental PAIP2 gene in a positive feedback loop by interacting with U1 snRNP complexes and RNA polymerase II [Chan et al. DOI:10.016/j.tibs.2018.09.016].