Basic Information

Symbol
circPDS5B
RNA Class
circRNA
Alias
PDS5 Cohesin Associated Factor B AS3 Androgen-Induced Proliferation Inhibitor KIAA0979 CG008 APRIN Androgen-Induced Prostate Proliferative Shutoff-Associated Protein AS3 Sister Chromatid Cohesion Protein PDS5 Homolog B FLJ23236 PDS5, Regulator Of Cohesion Maintenance, Homolog B (S. Cerevisiae) Androgen Induced Inhibitor Of Proliferation Androgen-Induced Shutoff 3
Location (GRCh37)
13:33160601-33352158 UCSC Genome Browser
Location (GRCh38)
13:32586464-32778020
UCSC Genome Browser Search in Marker Scope
Host gene
PDS5B
Host category
mRNA
Forensic tag(s)
Sudden death from CNS diseases Sudden cardiac death diagnosis
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_PDS5B_0022400 Exon-Exon chr13:33306238-33309467 chr13:32732101-32735330 283 nt 0.4099
hsa_PDS5B_0000200 Intron-Intron chr13:33163132-33163401 chr13:32588995-32589264 270 nt 0.3704
hsa_chr13_0121200 Intergenic-Intergenic chr13:33169819-33192945 chr13:32595682-32618808 250 nt 0.2560
hsa_PDS5B_0002100 Intron-Exon-Intron chr13:33208202-33268441 chr13:32634065-32694304 250 nt 0.3320
hsa_PDS5B_0002200 Intron-Exon-Intron chr13:33208202-33284243 chr13:32634065-32710106 250 nt 0.3320
hsa_PDS5B_0003600 Exon-Exon chr13:33222891-33226144 chr13:32648754-32652007 331 nt 0.3837
hsa_PDS5B_0003700 Exon-Exon chr13:33222891-33233417 chr13:32648754-32659280 643 nt 0.3701
hsa_PDS5B_0003800 Exon-Exon chr13:33222891-33250096 chr13:32648754-32675959 981 nt 0.3741
hsa_PDS5B_0003900 Exon-Exon chr13:33222891-33253066 chr13:32648754-32678929 1076 nt 0.3755
hsa_PDS5B_0004000 Exon-Exon chr13:33222891-33271039 chr13:32648754-32696902 1619 nt 0.3706
Showing 1 to 10 of 314 entries
Forensic Context

A study in humans identified circPDS5B as a biomarker positively correlated with infarct volume in acute ischemic stroke patients [Wei et al. DOI:10.1186/s12883-021-02397-0]. A study in humans demonstrated that hsa_circRNA_0004494, a circular RNA, was significantly downregulated in peripheral blood mononuclear cells from heart failure patients with sacubitril/valsartan resistance compared to non-resistant patients following acute myocardial infarction, as validated by quantitative real-time PCR in 18 sample pairs [Su et al. DOI:10.1016/j.ejphar.2023.175547].