Basic Information

Symbol
circPDS5B
RNA Class
circRNA
Alias
PDS5 Cohesin Associated Factor B AS3 Androgen-Induced Proliferation Inhibitor KIAA0979 CG008 APRIN Androgen-Induced Prostate Proliferative Shutoff-Associated Protein AS3 Sister Chromatid Cohesion Protein PDS5 Homolog B FLJ23236 PDS5, Regulator Of Cohesion Maintenance, Homolog B (S. Cerevisiae) Androgen Induced Inhibitor Of Proliferation Androgen-Induced Shutoff 3
Location (GRCh37)
13:33160601-33352158 UCSC Genome Browser
Location (GRCh38)
13:32586464-32778020
UCSC Genome Browser Search in Marker Scope
Host gene
PDS5B
Host category
mRNA
Forensic tag(s)
Sudden death from CNS diseases Sudden cardiac death diagnosis
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_PDS5B_0003000 Intron-Intron chr13:33211530-33211791 chr13:32637393-32637654 262 nt 0.3550
hsa_PDS5B_0003100 Intron-Intron chr13:33211532-33211791 chr13:32637395-32637654 260 nt 0.3538
hsa_chr13_0121400 Intergenic-Intergenic chr13:33218767-33219961 chr13:32644630-32645824 1195 nt 0.3289
hsa_PDS5B_0003200 Intron-Exon-Intron chr13:33221019-33233417 chr13:32646882-32659280 110 nt 0.3455
hsa_PDS5B_0003300 Intron-Exon-Intron chr13:33222877-33250096 chr13:32648740-32675959 141 nt 0.3688
hsa_PDS5B_0003400 Intron-Exon-Intron chr13:33222877-33253066 chr13:32648740-32678929 141 nt 0.3688
hsa_PDS5B_0003500 Intron-Exon-Intron chr13:33222877-33284243 chr13:32648740-32710106 141 nt 0.3688
hsa_PDS5B_0004600 Exon-Exon chr13:33222891-33232668 chr13:32648754-32658531 516 nt 0.3605
hsa_PDS5B_0004700 Exon-Exon chr13:33222891-33241981 chr13:32648754-32667844 214 nt 0.3972
hsa_PDS5B_0004800 Exon-Exon chr13:33222891-33258160 chr13:32648754-32684023 133 nt 0.3759
Showing 101 to 110 of 314 entries
Forensic Context

A study in humans identified circPDS5B as a biomarker positively correlated with infarct volume in acute ischemic stroke patients [Wei et al. DOI:10.1186/s12883-021-02397-0]. A study in humans demonstrated that hsa_circRNA_0004494, a circular RNA, was significantly downregulated in peripheral blood mononuclear cells from heart failure patients with sacubitril/valsartan resistance compared to non-resistant patients following acute myocardial infarction, as validated by quantitative real-time PCR in 18 sample pairs [Su et al. DOI:10.1016/j.ejphar.2023.175547].