Basic Information
Symbol
circPDS5B
RNA Class
circRNA
Alias
PDS5 Cohesin Associated Factor B
AS3
Androgen-Induced Proliferation Inhibitor
KIAA0979
CG008
APRIN
Androgen-Induced Prostate Proliferative Shutoff-Associated Protein AS3
Sister Chromatid Cohesion Protein PDS5 Homolog B
FLJ23236
PDS5, Regulator Of Cohesion Maintenance, Homolog B (S. Cerevisiae)
Androgen Induced Inhibitor Of Proliferation
Androgen-Induced Shutoff 3
Location (GRCh37)
13:33160601-33352158
UCSC Genome Browser
Location (GRCh38)
13:32586464-32778020
Host gene
PDS5B
Host category
mRNA
Forensic tag(s)
Sudden death from CNS diseases
Sudden cardiac death diagnosis
External database
Transcripts
| ID | Type | Location (GRCh37) | Location (GRCh38) | Length | GC content |
|---|---|---|---|---|---|
| hsa_PDS5B_0004900 | Exon-Exon | chr13:33222891-33261422 | chr13:32648754-32687285 | 127 nt | 0.3780 |
| hsa_PDS5B_0005000 | Exon-Exon | chr13:33222891-33262706 | chr13:32648754-32688569 | 127 nt | 0.3780 |
| hsa_PDS5B_0005100 | Exon-Exon | chr13:33222891-33275575 | chr13:32648754-32701438 | 116 nt | 0.4310 |
| hsa_PDS5B_0004400 | Exon-Exon | chr13:33222891-33316865 | chr13:32648754-32742727 | 2631 nt | 0.3801 |
| hsa_PDS5B_0004500 | Exon-Exon | chr13:33222891-33327674 | chr13:32648754-32753536 | 2960 nt | 0.3855 |
| hsa_PDS5B_0005200 | Exon-Exon | chr13:33222891-33334858 | chr13:32648754-32760720 | 209 nt | 0.4067 |
| hsa_PDS5B_0005300 | Exon-Exon | chr13:33222891-33347462 | chr13:32648754-32773324 | 371 nt | 0.4124 |
| hsa_PDS5B_0005400 | Exon-Exon | chr13:33222891-33349196 | chr13:32648754-32775058 | 42 nt | 0.5238 |
| hsa_PDS5B_0005500 | Exon-Exon | chr13:33222925-33253066 | chr13:32648788-32678929 | 93 nt | 0.3763 |
| hsa_PDS5B_0005600 | Exon-Exon | chr13:33223163-33223417 | chr13:32649026-32649280 | 255 nt | 0.3294 |
Showing 111 to 120 of 314 entries
Forensic Context
A study in humans identified circPDS5B as a biomarker positively correlated with infarct volume in acute ischemic stroke patients [Wei et al. DOI:10.1186/s12883-021-02397-0]. A study in humans demonstrated that hsa_circRNA_0004494, a circular RNA, was significantly downregulated in peripheral blood mononuclear cells from heart failure patients with sacubitril/valsartan resistance compared to non-resistant patients following acute myocardial infarction, as validated by quantitative real-time PCR in 18 sample pairs [Su et al. DOI:10.1016/j.ejphar.2023.175547].