Basic Information

Symbol
circPDS5B
RNA Class
circRNA
Alias
PDS5 Cohesin Associated Factor B AS3 Androgen-Induced Proliferation Inhibitor KIAA0979 CG008 APRIN Androgen-Induced Prostate Proliferative Shutoff-Associated Protein AS3 Sister Chromatid Cohesion Protein PDS5 Homolog B FLJ23236 PDS5, Regulator Of Cohesion Maintenance, Homolog B (S. Cerevisiae) Androgen Induced Inhibitor Of Proliferation Androgen-Induced Shutoff 3
Location (GRCh37)
13:33160601-33352158 UCSC Genome Browser
Location (GRCh38)
13:32586464-32778020
UCSC Genome Browser Search in Marker Scope
Host gene
PDS5B
Host category
mRNA
Forensic tag(s)
Sudden death from CNS diseases Sudden cardiac death diagnosis
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_PDS5B_0010400 Exon-Exon chr13:33247353-33275575 chr13:32673216-32701438 1151 nt 0.3823
hsa_PDS5B_0010500 Exon-Exon chr13:33247353-33281176 chr13:32673216-32707039 1257 nt 0.3842
hsa_PDS5B_0011000 Exon-Exon chr13:33247353-33309467 chr13:32673216-32735330 141 nt 0.3475
hsa_PDS5B_0011100 Exon-Exon chr13:33247353-33315286 chr13:32673216-32741148 69 nt 0.4058
hsa_PDS5B_0011200 Exon-Exon chr13:33247353-33320238 chr13:32673216-32746100 141 nt 0.3475
hsa_PDS5B_0011300 Exon-Exon chr13:33247394-33258160 chr13:32673257-32684023 457 nt 0.3829
hsa_PDS5B_0011400 Exon-Exon chr13:33247476-33275575 chr13:32673339-32701438 1028 nt 0.3833
hsa_PDS5B_0011500 Intron-Exon-Intron chr13:33248747-33250096 chr13:32674610-32675959 1350 nt 0.3504
hsa_PDS5B_0011800 Exon-Exon chr13:33249981-33253066 chr13:32675844-32678929 211 nt 0.4171
hsa_PDS5B_0011900 Exon-Exon chr13:33249981-33262706 chr13:32675844-32688569 623 nt 0.3788
Showing 161 to 170 of 314 entries
Forensic Context

A study in humans identified circPDS5B as a biomarker positively correlated with infarct volume in acute ischemic stroke patients [Wei et al. DOI:10.1186/s12883-021-02397-0]. A study in humans demonstrated that hsa_circRNA_0004494, a circular RNA, was significantly downregulated in peripheral blood mononuclear cells from heart failure patients with sacubitril/valsartan resistance compared to non-resistant patients following acute myocardial infarction, as validated by quantitative real-time PCR in 18 sample pairs [Su et al. DOI:10.1016/j.ejphar.2023.175547].