Basic Information
Symbol
circPDS5B
RNA Class
circRNA
Alias
PDS5 Cohesin Associated Factor B
AS3
Androgen-Induced Proliferation Inhibitor
KIAA0979
CG008
APRIN
Androgen-Induced Prostate Proliferative Shutoff-Associated Protein AS3
Sister Chromatid Cohesion Protein PDS5 Homolog B
FLJ23236
PDS5, Regulator Of Cohesion Maintenance, Homolog B (S. Cerevisiae)
Androgen Induced Inhibitor Of Proliferation
Androgen-Induced Shutoff 3
Location (GRCh37)
13:33160601-33352158
UCSC Genome Browser
Location (GRCh38)
13:32586464-32778020
Host gene
PDS5B
Host category
mRNA
Forensic tag(s)
Sudden death from CNS diseases
Sudden cardiac death diagnosis
External database
Transcripts
| ID | Type | Location (GRCh37) | Location (GRCh38) | Length | GC content |
|---|---|---|---|---|---|
| hsa_PDS5B_0012000 | Exon-Exon | chr13:33249981-33271039 | chr13:32675844-32696902 | 754 nt | 0.3767 |
| hsa_PDS5B_0012100 | Exon-Exon | chr13:33249981-33275575 | chr13:32675844-32701438 | 1010 nt | 0.3871 |
| hsa_PDS5B_0012200 | Exon-Exon | chr13:33249981-33284243 | chr13:32675844-32710106 | 161 nt | 0.3602 |
| hsa_PDS5B_0011700 | Exon-Exon | chr13:33249981-33334858 | chr13:32675844-32760720 | 2672 nt | 0.3885 |
| hsa_PDS5B_0012300 | Exon-Exon | chr13:33250083-33275575 | chr13:32675946-32701438 | 908 nt | 0.3833 |
| hsa_PDS5B_0012600 | Exon-Exon | chr13:33252972-33261422 | chr13:32678835-32687285 | 393 nt | 0.3664 |
| hsa_PDS5B_0012700 | Intron-Exon-Intron | chr13:33252972-33262027 | chr13:32678835-32687890 | 95 nt | 0.3895 |
| hsa_PDS5B_0012800 | Exon-Exon | chr13:33252972-33262706 | chr13:32678835-32688569 | 114 nt | 0.3596 |
| hsa_PDS5B_0012900 | Exon-Exon | chr13:33252972-33268441 | chr13:32678835-32694304 | 177 nt | 0.3785 |
| hsa_PDS5B_0013000 | Exon-Exon | chr13:33252972-33273919 | chr13:32678835-32699782 | 53 nt | 0.3962 |
Showing 171 to 180 of 314 entries
Forensic Context
A study in humans identified circPDS5B as a biomarker positively correlated with infarct volume in acute ischemic stroke patients [Wei et al. DOI:10.1186/s12883-021-02397-0]. A study in humans demonstrated that hsa_circRNA_0004494, a circular RNA, was significantly downregulated in peripheral blood mononuclear cells from heart failure patients with sacubitril/valsartan resistance compared to non-resistant patients following acute myocardial infarction, as validated by quantitative real-time PCR in 18 sample pairs [Su et al. DOI:10.1016/j.ejphar.2023.175547].