Basic Information

Symbol
circPDS5B
RNA Class
circRNA
Alias
PDS5 Cohesin Associated Factor B AS3 Androgen-Induced Proliferation Inhibitor KIAA0979 CG008 APRIN Androgen-Induced Prostate Proliferative Shutoff-Associated Protein AS3 Sister Chromatid Cohesion Protein PDS5 Homolog B FLJ23236 PDS5, Regulator Of Cohesion Maintenance, Homolog B (S. Cerevisiae) Androgen Induced Inhibitor Of Proliferation Androgen-Induced Shutoff 3
Location (GRCh37)
13:33160601-33352158 UCSC Genome Browser
Location (GRCh38)
13:32586464-32778020
UCSC Genome Browser Search in Marker Scope
Host gene
PDS5B
Host category
mRNA
Forensic tag(s)
Sudden death from CNS diseases Sudden cardiac death diagnosis
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_PDS5B_0013300 Exon-Exon chr13:33258015-33271039 chr13:32683878-32696902 277 nt 0.3610
hsa_PDS5B_0013400 Exon-Exon chr13:33258015-33275575 chr13:32683878-32701438 312 nt 0.3878
hsa_PDS5B_0013500 Exon-Exon chr13:33258015-33306361 chr13:32683878-32732224 124 nt 0.4032
hsa_PDS5B_0013600 Exon-Exon chr13:33258015-33309467 chr13:32683878-32735330 146 nt 0.3562
hsa_PDS5B_0013700 Exon-Exon chr13:33258015-33330094 chr13:32683878-32755956 146 nt 0.3562
hsa_PDS5B_0013800 Exon-Exon chr13:33258081-33334858 chr13:32683944-32760720 2395 nt 0.3862
hsa_PDS5B_0013900 Intron-Intron chr13:33258510-33259373 chr13:32684373-32685236 864 nt 0.4294
hsa_chr13_0121700 Intergenic-Intergenic chr13:33259894-33261522 chr13:32685757-32687385 1629 nt 0.3493
hsa_PDS5B_0014600 Exon-Exon chr13:33261271-33268441 chr13:32687134-32694304 152 nt 0.3618
hsa_PDS5B_0014700 Exon-Exon chr13:33261271-33275575 chr13:32687134-32701438 122 nt 0.4344
Showing 181 to 190 of 314 entries
Forensic Context

A study in humans identified circPDS5B as a biomarker positively correlated with infarct volume in acute ischemic stroke patients [Wei et al. DOI:10.1186/s12883-021-02397-0]. A study in humans demonstrated that hsa_circRNA_0004494, a circular RNA, was significantly downregulated in peripheral blood mononuclear cells from heart failure patients with sacubitril/valsartan resistance compared to non-resistant patients following acute myocardial infarction, as validated by quantitative real-time PCR in 18 sample pairs [Su et al. DOI:10.1016/j.ejphar.2023.175547].