Basic Information

Symbol
circPDS5B
RNA Class
circRNA
Alias
PDS5 Cohesin Associated Factor B AS3 Androgen-Induced Proliferation Inhibitor KIAA0979 CG008 APRIN Androgen-Induced Prostate Proliferative Shutoff-Associated Protein AS3 Sister Chromatid Cohesion Protein PDS5 Homolog B FLJ23236 PDS5, Regulator Of Cohesion Maintenance, Homolog B (S. Cerevisiae) Androgen Induced Inhibitor Of Proliferation Androgen-Induced Shutoff 3
Location (GRCh37)
13:33160601-33352158 UCSC Genome Browser
Location (GRCh38)
13:32586464-32778020
UCSC Genome Browser Search in Marker Scope
Host gene
PDS5B
Host category
mRNA
Forensic tag(s)
Sudden death from CNS diseases Sudden cardiac death diagnosis
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_PDS5B_0014800 Exon-Exon chr13:33261271-33309467 chr13:32687134-32735330 159 nt 0.4151
hsa_PDS5B_0014300 Exon-Exon chr13:33261271-33315286 chr13:32687134-32741148 1272 nt 0.3899
hsa_PDS5B_0014400 Exon-Exon chr13:33261271-33327674 chr13:32687134-32753536 1738 nt 0.3941
hsa_PDS5B_0014500 Exon-Exon chr13:33261271-33330094 chr13:32687134-32755956 1853 nt 0.3896
hsa_PDS5B_0014900 Exon-Exon chr13:33261271-33332791 chr13:32687134-32758653 120 nt 0.4167
hsa_PDS5B_0015000 Exon-Exon chr13:33261271-33347462 chr13:32687134-32773324 136 nt 0.4338
hsa_PDS5B_0015100 Exon-Exon chr13:33261334-33275575 chr13:32687197-32701438 590 nt 0.3831
hsa_PDS5B_0015200 Intron-Intron chr13:33261614-33261964 chr13:32687477-32687827 351 nt 0.2621
hsa_PDS5B_0015500 Exon-Exon chr13:33262593-33274006 chr13:32688456-32699869 385 nt 0.3792
hsa_PDS5B_0015600 Exon-Exon chr13:33262593-33275575 chr13:32688456-32701438 501 nt 0.3912
Showing 191 to 200 of 314 entries
Forensic Context

A study in humans identified circPDS5B as a biomarker positively correlated with infarct volume in acute ischemic stroke patients [Wei et al. DOI:10.1186/s12883-021-02397-0]. A study in humans demonstrated that hsa_circRNA_0004494, a circular RNA, was significantly downregulated in peripheral blood mononuclear cells from heart failure patients with sacubitril/valsartan resistance compared to non-resistant patients following acute myocardial infarction, as validated by quantitative real-time PCR in 18 sample pairs [Su et al. DOI:10.1016/j.ejphar.2023.175547].