Basic Information

Symbol
circPDS5B
RNA Class
circRNA
Alias
PDS5 Cohesin Associated Factor B AS3 Androgen-Induced Proliferation Inhibitor KIAA0979 CG008 APRIN Androgen-Induced Prostate Proliferative Shutoff-Associated Protein AS3 Sister Chromatid Cohesion Protein PDS5 Homolog B FLJ23236 PDS5, Regulator Of Cohesion Maintenance, Homolog B (S. Cerevisiae) Androgen Induced Inhibitor Of Proliferation Androgen-Induced Shutoff 3
Location (GRCh37)
13:33160601-33352158 UCSC Genome Browser
Location (GRCh38)
13:32586464-32778020
UCSC Genome Browser Search in Marker Scope
Host gene
PDS5B
Host category
mRNA
Forensic tag(s)
Sudden death from CNS diseases Sudden cardiac death diagnosis
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_chr13_0121800 Intergenic-Intergenic chr13:33290649-33295455 chr13:32716512-32721318 250 nt 0.6240
hsa_PDS5B_0023400 Exon-Exon chr13:33306238-33330094 chr13:32732101-32755956 933 nt 0.3966
hsa_PDS5B_0023500 Exon-Exon chr13:33306238-33333828 chr13:32732101-32759690 63 nt 0.3175
hsa_PDS5B_0023600 Exon-Exon chr13:33306238-33347462 chr13:32732101-32773324 142 nt 0.4366
hsa_PDS5B_0023700 Exon-Exon chr13:33306238-33349196 chr13:32732101-32775058 178 nt 0.4551
hsa_PDS5B_0023800 Exon-Exon chr13:33306240-33309467 chr13:32732103-32735330 122 nt 0.4016
hsa_PDS5B_0023900 Exon-Exon chr13:33306276-33320238 chr13:32732139-32746100 130 nt 0.4385
hsa_PDS5B_0024000 Intron-Intron chr13:33306696-33308967 chr13:32732559-32734830 2272 nt 0.3578
hsa_PDS5B_0024300 Exon-Exon chr13:33309309-33315286 chr13:32735172-32741148 69 nt 0.4058
hsa_PDS5B_0024400 Exon-Exon chr13:33309309-33320238 chr13:32735172-32746100 159 nt 0.4151
Showing 251 to 260 of 314 entries
Forensic Context

A study in humans identified circPDS5B as a biomarker positively correlated with infarct volume in acute ischemic stroke patients [Wei et al. DOI:10.1186/s12883-021-02397-0]. A study in humans demonstrated that hsa_circRNA_0004494, a circular RNA, was significantly downregulated in peripheral blood mononuclear cells from heart failure patients with sacubitril/valsartan resistance compared to non-resistant patients following acute myocardial infarction, as validated by quantitative real-time PCR in 18 sample pairs [Su et al. DOI:10.1016/j.ejphar.2023.175547].