Basic Information

Symbol
circPDS5B
RNA Class
circRNA
Alias
PDS5 Cohesin Associated Factor B AS3 Androgen-Induced Proliferation Inhibitor KIAA0979 CG008 APRIN Androgen-Induced Prostate Proliferative Shutoff-Associated Protein AS3 Sister Chromatid Cohesion Protein PDS5 Homolog B FLJ23236 PDS5, Regulator Of Cohesion Maintenance, Homolog B (S. Cerevisiae) Androgen Induced Inhibitor Of Proliferation Androgen-Induced Shutoff 3
Location (GRCh37)
13:33160601-33352158 UCSC Genome Browser
Location (GRCh38)
13:32586464-32778020
UCSC Genome Browser Search in Marker Scope
Host gene
PDS5B
Host category
mRNA
Forensic tag(s)
Sudden death from CNS diseases Sudden cardiac death diagnosis
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_PDS5B_0024100 Exon-Exon chr13:33309309-33327674 chr13:32735172-32753536 694 nt 0.4078
hsa_PDS5B_0024200 Exon-Exon chr13:33309309-33334858 chr13:32735172-32760720 1271 nt 0.3902
hsa_chr13_0121900 Intergenic-Intergenic chr13:33309339-33320166 chr13:32735202-32746028 387 nt 0.3902
hsa_PDS5B_0024500 Exon-Exon chr13:33309430-33327634 chr13:32735293-32753496 244 nt 0.3689
hsa_PDS5B_0024600 Exon-Exon chr13:33309430-33334858 chr13:32735293-32760720 44 nt 0.4318
hsa_PDS5B_0024700 Exon-Exon chr13:33309448-33330094 chr13:32735311-32755956 135 nt 0.3333
hsa_PDS5B_0024800 Intron-Intron chr13:33314622-33314940 chr13:32740484-32740802 319 nt 0.3574
hsa_PDS5B_0025000 Exon-Exon chr13:33315218-33327674 chr13:32741080-32753536 535 nt 0.4056
hsa_PDS5B_0025100 Exon-Exon chr13:33315218-33334858 chr13:32741080-32760720 75 nt 0.4400
hsa_PDS5B_0025200 Exon-Exon chr13:33315225-33316783 chr13:32741087-32742645 117 nt 0.3590
Showing 261 to 270 of 314 entries
Forensic Context

A study in humans identified circPDS5B as a biomarker positively correlated with infarct volume in acute ischemic stroke patients [Wei et al. DOI:10.1186/s12883-021-02397-0]. A study in humans demonstrated that hsa_circRNA_0004494, a circular RNA, was significantly downregulated in peripheral blood mononuclear cells from heart failure patients with sacubitril/valsartan resistance compared to non-resistant patients following acute myocardial infarction, as validated by quantitative real-time PCR in 18 sample pairs [Su et al. DOI:10.1016/j.ejphar.2023.175547].