Basic Information

Symbol
circPDS5B
RNA Class
circRNA
Alias
PDS5 Cohesin Associated Factor B AS3 Androgen-Induced Proliferation Inhibitor KIAA0979 CG008 APRIN Androgen-Induced Prostate Proliferative Shutoff-Associated Protein AS3 Sister Chromatid Cohesion Protein PDS5 Homolog B FLJ23236 PDS5, Regulator Of Cohesion Maintenance, Homolog B (S. Cerevisiae) Androgen Induced Inhibitor Of Proliferation Androgen-Induced Shutoff 3
Location (GRCh37)
13:33160601-33352158 UCSC Genome Browser
Location (GRCh38)
13:32586464-32778020
UCSC Genome Browser Search in Marker Scope
Host gene
PDS5B
Host category
mRNA
Forensic tag(s)
Sudden death from CNS diseases Sudden cardiac death diagnosis
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_PDS5B_0025300 Exon-Exon chr13:33316729-33320238 chr13:32742591-32746100 261 nt 0.3831
hsa_chr13_0122000 Intergenic-Intergenic chr13:33317488-33318348 chr13:32743350-32744210 861 nt 0.3043
hsa_chr13_0122100 Intergenic-Intergenic chr13:33319461-33319933 chr13:32745323-32745795 473 nt 0.4059
hsa_chr13_0122200 Intergenic-Intergenic chr13:33319906-33320083 chr13:32745768-32745945 178 nt 0.3258
hsa_PDS5B_0025500 Exon-Exon chr13:33320115-33330094 chr13:32745977-32755956 124 nt 0.4194
hsa_PDS5B_0025400 Exon-Exon chr13:33320115-33332357 chr13:32745977-32758219 577 nt 0.3795
hsa_PDS5B_0025600 Intron-Exon-Intron chr13:33327319-33334858 chr13:32753181-32760720 933 nt 0.3741
hsa_PDS5B_0026300 Exon-Exon chr13:33327470-33327674 chr13:32753332-32753536 205 nt 0.4341
hsa_PDS5B_0026400 Intron-Exon-Intron chr13:33327470-33328095 chr13:32753332-32753957 626 nt 0.3339
hsa_PDS5B_0026700 Exon-Exon chr13:33327470-33332357 chr13:32753332-32758219 133 nt 0.3083
Showing 271 to 280 of 314 entries
Forensic Context

A study in humans identified circPDS5B as a biomarker positively correlated with infarct volume in acute ischemic stroke patients [Wei et al. DOI:10.1186/s12883-021-02397-0]. A study in humans demonstrated that hsa_circRNA_0004494, a circular RNA, was significantly downregulated in peripheral blood mononuclear cells from heart failure patients with sacubitril/valsartan resistance compared to non-resistant patients following acute myocardial infarction, as validated by quantitative real-time PCR in 18 sample pairs [Su et al. DOI:10.1016/j.ejphar.2023.175547].