Basic Information
Symbol
circPDS5B
RNA Class
circRNA
Alias
PDS5 Cohesin Associated Factor B
AS3
Androgen-Induced Proliferation Inhibitor
KIAA0979
CG008
APRIN
Androgen-Induced Prostate Proliferative Shutoff-Associated Protein AS3
Sister Chromatid Cohesion Protein PDS5 Homolog B
FLJ23236
PDS5, Regulator Of Cohesion Maintenance, Homolog B (S. Cerevisiae)
Androgen Induced Inhibitor Of Proliferation
Androgen-Induced Shutoff 3
Location (GRCh37)
13:33160601-33352158
UCSC Genome Browser
Location (GRCh38)
13:32586464-32778020
Host gene
PDS5B
Host category
mRNA
Forensic tag(s)
Sudden death from CNS diseases
Sudden cardiac death diagnosis
External database
Transcripts
| ID | Type | Location (GRCh37) | Location (GRCh38) | Length | GC content |
|---|---|---|---|---|---|
| hsa_PDS5B_0026800 | Exon-Exon | chr13:33327470-33332791 | chr13:32753332-32758653 | 126 nt | 0.4127 |
| hsa_PDS5B_0026500 | Exon-Exon | chr13:33327470-33333828 | chr13:32753332-32759690 | 636 nt | 0.3726 |
| hsa_PDS5B_0026900 | Exon-Exon | chr13:33327470-33344899 | chr13:32753332-32770761 | 108 nt | 0.4259 |
| hsa_PDS5B_0027000 | Exon-Exon | chr13:33327470-33347462 | chr13:32753332-32773324 | 341 nt | 0.4340 |
| hsa_PDS5B_0026600 | Exon-Exon | chr13:33327470-33349196 | chr13:32753332-32775058 | 1614 nt | 0.4139 |
| hsa_PDS5B_0027100 | Exon-Exon | chr13:33329980-33334858 | chr13:32755842-32760720 | 266 nt | 0.4323 |
| hsa_PDS5B_0027200 | Exon-Exon | chr13:33330004-33332357 | chr13:32755866-32758219 | 224 nt | 0.3170 |
| hsa_chr13_0122300 | Intergenic-Intergenic | chr13:33330558-33331496 | chr13:32756420-32757358 | 939 nt | 0.3706 |
| hsa_PDS5B_0027500 | Exon-Exon | chr13:33332225-33338732 | chr13:32758087-32764594 | 133 nt | 0.3083 |
| hsa_PDS5B_0027400 | Exon-Exon | chr13:33332225-33344698 | chr13:32758087-32770560 | 1008 nt | 0.4117 |
Showing 281 to 290 of 314 entries
Forensic Context
A study in humans identified circPDS5B as a biomarker positively correlated with infarct volume in acute ischemic stroke patients [Wei et al. DOI:10.1186/s12883-021-02397-0]. A study in humans demonstrated that hsa_circRNA_0004494, a circular RNA, was significantly downregulated in peripheral blood mononuclear cells from heart failure patients with sacubitril/valsartan resistance compared to non-resistant patients following acute myocardial infarction, as validated by quantitative real-time PCR in 18 sample pairs [Su et al. DOI:10.1016/j.ejphar.2023.175547].