Basic Information

Symbol
circPDS5B
RNA Class
circRNA
Alias
PDS5 Cohesin Associated Factor B AS3 Androgen-Induced Proliferation Inhibitor KIAA0979 CG008 APRIN Androgen-Induced Prostate Proliferative Shutoff-Associated Protein AS3 Sister Chromatid Cohesion Protein PDS5 Homolog B FLJ23236 PDS5, Regulator Of Cohesion Maintenance, Homolog B (S. Cerevisiae) Androgen Induced Inhibitor Of Proliferation Androgen-Induced Shutoff 3
Location (GRCh37)
13:33160601-33352158 UCSC Genome Browser
Location (GRCh38)
13:32586464-32778020
UCSC Genome Browser Search in Marker Scope
Host gene
PDS5B
Host category
mRNA
Forensic tag(s)
Sudden death from CNS diseases Sudden cardiac death diagnosis
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_PDS5B_0027600 Exon-Exon chr13:33332672-33334858 chr13:32758534-32760720 146 nt 0.4452
hsa_PDS5B_0027700 Intron-Exon-Intron chr13:33332672-33347719 chr13:32758534-32773581 183 nt 0.3825
hsa_chr13_0122400 Intergenic-Intergenic chr13:33332753-33333820 chr13:32758615-32759682 94 nt 0.3936
hsa_PDS5B_0028000 Exon-Exon chr13:33333766-33334858 chr13:32759628-32760720 63 nt 0.3175
hsa_PDS5B_0027800 Exon-Exon chr13:33333766-33338732 chr13:32759628-32764594 315 nt 0.4063
hsa_PDS5B_0027900 Exon-Exon chr13:33333766-33344698 chr13:32759628-32770560 755 nt 0.4291
hsa_PDS5B_0028100 Exon-Exon chr13:33333766-33347462 chr13:32759628-32773324 171 nt 0.3860
hsa_PDS5B_0028200 Exon-Exon chr13:33334713-33334858 chr13:32760575-32760720 146 nt 0.4452
hsa_PDS5B_0028300 Exon-Exon chr13:33334713-33338732 chr13:32760575-32764594 252 nt 0.4286
hsa_PDS5B_0028400 Exon-Exon chr13:33334713-33347462 chr13:32760575-32773324 936 nt 0.4370
Showing 291 to 300 of 314 entries
Forensic Context

A study in humans identified circPDS5B as a biomarker positively correlated with infarct volume in acute ischemic stroke patients [Wei et al. DOI:10.1186/s12883-021-02397-0]. A study in humans demonstrated that hsa_circRNA_0004494, a circular RNA, was significantly downregulated in peripheral blood mononuclear cells from heart failure patients with sacubitril/valsartan resistance compared to non-resistant patients following acute myocardial infarction, as validated by quantitative real-time PCR in 18 sample pairs [Su et al. DOI:10.1016/j.ejphar.2023.175547].