Basic Information

Symbol
circPDS5B
RNA Class
circRNA
Alias
PDS5 Cohesin Associated Factor B AS3 Androgen-Induced Proliferation Inhibitor KIAA0979 CG008 APRIN Androgen-Induced Prostate Proliferative Shutoff-Associated Protein AS3 Sister Chromatid Cohesion Protein PDS5 Homolog B FLJ23236 PDS5, Regulator Of Cohesion Maintenance, Homolog B (S. Cerevisiae) Androgen Induced Inhibitor Of Proliferation Androgen-Induced Shutoff 3
Location (GRCh37)
13:33160601-33352158 UCSC Genome Browser
Location (GRCh38)
13:32586464-32778020
UCSC Genome Browser Search in Marker Scope
Host gene
PDS5B
Host category
mRNA
Forensic tag(s)
Sudden death from CNS diseases Sudden cardiac death diagnosis
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_PDS5B_0016500 Exon-Exon chr13:33268360-33309467 chr13:32694223-32735330 937 nt 0.3970
hsa_PDS5B_0016600 Exon-Exon chr13:33268360-33315286 chr13:32694223-32741148 1006 nt 0.3976
hsa_PDS5B_0016700 Exon-Exon chr13:33268360-33320238 chr13:32694223-32746100 1267 nt 0.3946
hsa_PDS5B_0016800 Exon-Exon chr13:33268360-33327674 chr13:32694223-32753536 1472 nt 0.4001
hsa_PDS5B_0016900 Exon-Exon chr13:33268360-33334858 chr13:32694223-32760720 2049 nt 0.3914
hsa_PDS5B_0017500 Exon-Exon chr13:33270991-33284243 chr13:32696854-32710106 572 nt 0.3951
hsa_PDS5B_0019100 Exon-Exon chr13:33275460-33284243 chr13:32701323-32710106 383 nt 0.3943
hsa_PDS5B_0019200 Exon-Exon chr13:33275460-33309467 chr13:32701323-32735330 666 nt 0.4009
hsa_PDS5B_0019300 Exon-Exon chr13:33275460-33330094 chr13:32701323-32755956 1316 nt 0.3959
hsa_PDS5B_0019400 Exon-Intergenic chr13:33275460-33352158 chr13:32701323-32778020 250 nt 0.2800
Showing 41 to 50 of 314 entries
Forensic Context

A study in humans identified circPDS5B as a biomarker positively correlated with infarct volume in acute ischemic stroke patients [Wei et al. DOI:10.1186/s12883-021-02397-0]. A study in humans demonstrated that hsa_circRNA_0004494, a circular RNA, was significantly downregulated in peripheral blood mononuclear cells from heart failure patients with sacubitril/valsartan resistance compared to non-resistant patients following acute myocardial infarction, as validated by quantitative real-time PCR in 18 sample pairs [Su et al. DOI:10.1016/j.ejphar.2023.175547].