Basic Information

Symbol
circPDS5B
RNA Class
circRNA
Alias
PDS5 Cohesin Associated Factor B AS3 Androgen-Induced Proliferation Inhibitor KIAA0979 CG008 APRIN Androgen-Induced Prostate Proliferative Shutoff-Associated Protein AS3 Sister Chromatid Cohesion Protein PDS5 Homolog B FLJ23236 PDS5, Regulator Of Cohesion Maintenance, Homolog B (S. Cerevisiae) Androgen Induced Inhibitor Of Proliferation Androgen-Induced Shutoff 3
Location (GRCh37)
13:33160601-33352158 UCSC Genome Browser
Location (GRCh38)
13:32586464-32778020
UCSC Genome Browser Search in Marker Scope
Host gene
PDS5B
Host category
mRNA
Forensic tag(s)
Sudden death from CNS diseases Sudden cardiac death diagnosis
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_PDS5B_0029000 Exon-Exon chr13:33344259-33347462 chr13:32770121-32773324 684 nt 0.4401
hsa_PDS5B_0000100 Exon-Exon chr13:33160601-33232462 chr13:32586464-32658325 548 nt 0.4562
hsa_PDS5B_0000300 Intron-Intron chr13:33166966-33167168 chr13:32592829-32593031 203 nt 0.3251
hsa_chr13_0121000 Intergenic-Intergenic chr13:33167022-33169741 chr13:32592885-32595604 2720 nt 0.3875
hsa_PDS5B_0000400 Intron-Exon-Intron chr13:33167158-33284243 chr13:32593021-32710106 250 nt 0.2960
hsa_chr13_0121100 Intergenic-Intergenic chr13:33167560-33174798 chr13:32593423-32600661 250 nt 0.4160
hsa_PDS5B_0000500 Intron-Intron chr13:33167756-33194512 chr13:32593619-32620375 250 nt 0.2920
hsa_PDS5B_0000600 Intron-Intron chr13:33170012-33170213 chr13:32595875-32596076 202 nt 0.2921
hsa_PDS5B_0000700 Intron-Intron chr13:33170267-33170685 chr13:32596130-32596548 419 nt 0.3437
hsa_chr13_0121300 Intergenic-Intergenic chr13:33173483-33174798 chr13:32599346-32600661 1316 nt 0.4369
Showing 71 to 80 of 314 entries
Forensic Context

A study in humans identified circPDS5B as a biomarker positively correlated with infarct volume in acute ischemic stroke patients [Wei et al. DOI:10.1186/s12883-021-02397-0]. A study in humans demonstrated that hsa_circRNA_0004494, a circular RNA, was significantly downregulated in peripheral blood mononuclear cells from heart failure patients with sacubitril/valsartan resistance compared to non-resistant patients following acute myocardial infarction, as validated by quantitative real-time PCR in 18 sample pairs [Su et al. DOI:10.1016/j.ejphar.2023.175547].