Basic Information
Symbol
circPRDM5
RNA Class
circRNA
Alias
PR/SET Domain 5
PFM2
PR Domain Zinc Finger Protein 5
PR Domain Containing 5
PR Domain 5
PR Domain-Containing Protein 5
EC 2.1.1.-
BCS2
Location (GRCh37)
4:121490374-121843078
UCSC Genome Browser
Location (GRCh38)
4:120569219-120921923
Host gene
PRDM5
Host category
mRNA
Forensic tag(s)
Sudden cardiac death diagnosis
External database
Transcripts
| ID | Type | Location (GRCh37) | Location (GRCh38) | Length | GC content |
|---|---|---|---|---|---|
| hsa_PRDM5_0001800 | Exon-Exon | chr4:121631464-121706246 | chr4:120710309-120785091 | 540 nt | 0.4500 |
| hsa_PRDM5_0001900 | Exon-Exon | chr4:121631464-121732604 | chr4:120710309-120811449 | 863 nt | 0.4148 |
| hsa_PRDM5_0002000 | Exon-Exon | chr4:121631464-121739682 | chr4:120710309-120818527 | 1253 nt | 0.4334 |
| hsa_PRDM5_0002100 | Exon-Exon | chr4:121631464-121742500 | chr4:120710309-120821345 | 1428 nt | 0.4314 |
| hsa_PRDM5_0003800 | Exon-Exon | chr4:121675708-121706246 | chr4:120754553-120785091 | 435 nt | 0.4276 |
| hsa_PRDM5_0003900 | Exon-Exon | chr4:121675708-121732604 | chr4:120754553-120811449 | 758 nt | 0.3971 |
| hsa_PRDM5_0004000 | Exon-Exon | chr4:121675708-121737729 | chr4:120754553-120816574 | 880 nt | 0.4170 |
| hsa_PRDM5_0004100 | Exon-Exon | chr4:121675708-121742500 | chr4:120754553-120821345 | 1323 nt | 0.4225 |
| hsa_PRDM5_0004200 | Exon-Exon | chr4:121675708-121828712 | chr4:120754553-120907557 | 1530 nt | 0.4307 |
| hsa_PRDM5_0005500 | Exon-Exon | chr4:121698343-121706246 | chr4:120777188-120785091 | 349 nt | 0.4269 |
Showing 1 to 10 of 118 entries
Forensic Context
A study in humans demonstrated that serum levels of circPRDM5 were significantly decreased in acute myocardial infarction (AMI) patients compared to healthy controls and angina patients, with an area under the receiver operating characteristic curve of 0.862 [Liu et al. DOI:10.1016/j.gene.2024.148142].