Basic Information

Symbol
circPRDM5
RNA Class
circRNA
Alias
PR/SET Domain 5 PFM2 PR Domain Zinc Finger Protein 5 PR Domain Containing 5 PR Domain 5 PR Domain-Containing Protein 5 EC 2.1.1.- BCS2
Location (GRCh37)
4:121490374-121843078 UCSC Genome Browser
Location (GRCh38)
4:120569219-120921923
UCSC Genome Browser Search in Marker Scope
Host gene
PRDM5
Host category
mRNA
Forensic tag(s)
Sudden cardiac death diagnosis
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_PRDM5_0009000 Exon-Exon chr4:121732525-121774695 chr4:120811370-120853540 86 nt 0.3721
hsa_PRDM5_0009100 Intron-Exon-Intron chr4:121732525-121777759 chr4:120811370-120856604 80 nt 0.3625
hsa_chr4_0090700 Intergenic-Intergenic chr4:121732919-121734845 chr4:120811764-120813690 1927 nt 0.3124
hsa_chr4_0090800 Intergenic-Intergenic chr4:121734912-121735681 chr4:120813757-120814526 770 nt 0.4351
hsa_PRDM5_0009200 Exon-Exon chr4:121737608-121742500 chr4:120816453-120821345 175 nt 0.4171
hsa_PRDM5_0009300 Exon-Exon chr4:121737608-121774695 chr4:120816453-120853540 77 nt 0.4545
hsa_PRDM5_0009400 Exon-Exon chr4:121739508-121742500 chr4:120818353-120821345 350 nt 0.4286
hsa_PRDM5_0009500 Intron-Exon-Intron chr4:121739508-121742669 chr4:120818353-120821514 519 nt 0.3796
hsa_PRDM5_0009600 Exon-Exon chr4:121739508-121828712 chr4:120818353-120907557 557 nt 0.4488
hsa_PRDM5_0009800 Intron-Exon-Intron chr4:121768992-121774695 chr4:120847837-120853540 256 nt 0.4688
Showing 91 to 100 of 118 entries
Forensic Context

A study in humans demonstrated that serum levels of circPRDM5 were significantly decreased in acute myocardial infarction (AMI) patients compared to healthy controls and angina patients, with an area under the receiver operating characteristic curve of 0.862 [Liu et al. DOI:10.1016/j.gene.2024.148142].