Basic Information

Symbol
circPRDM5
RNA Class
circRNA
Alias
PR/SET Domain 5 PFM2 PR Domain Zinc Finger Protein 5 PR Domain Containing 5 PR Domain 5 PR Domain-Containing Protein 5 EC 2.1.1.- BCS2
Location (GRCh37)
4:121490374-121843078 UCSC Genome Browser
Location (GRCh38)
4:120569219-120921923
UCSC Genome Browser Search in Marker Scope
Host gene
PRDM5
Host category
mRNA
Forensic tag(s)
Sudden cardiac death diagnosis
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_PRDM5_0009700 Intron-Exon-Intron chr4:121768992-121777759 chr4:120847837-120856604 250 nt 0.3640
hsa_PRDM5_0009900 Intron-Exon-Intron chr4:121769597-121828712 chr4:120848442-120907557 250 nt 0.3200
hsa_PRDM5_0010000 Intron-Exon-Intron chr4:121769597-121834540 chr4:120848442-120913385 250 nt 0.3240
hsa_PRDM5_0010100 Intron-Exon-Intron chr4:121774573-121777747 chr4:120853418-120856592 250 nt 0.3880
hsa_PRDM5_0010200 Intron-Exon-Intron chr4:121774573-121777759 chr4:120853418-120856604 250 nt 0.3760
hsa_PRDM5_0010400 Intron-Exon-Intron chr4:121774573-121781764 chr4:120853418-120860609 89 nt 0.3933
hsa_PRDM5_0010500 Intron-Exon-Intron chr4:121774573-121805777 chr4:120853418-120884622 75 nt 0.3733
hsa_PRDM5_0010300 Exon-Exon chr4:121774573-121828712 chr4:120853418-120907557 207 nt 0.4831
hsa_PRDM5_0010600 Intron-Exon-Intron chr4:121774573-121834540 chr4:120853418-120913385 131 nt 0.4809
hsa_PRDM5_0010700 Intron-Intron chr4:121778552-121778916 chr4:120857397-120857761 365 nt 0.3644
Showing 101 to 110 of 118 entries
Forensic Context

A study in humans demonstrated that serum levels of circPRDM5 were significantly decreased in acute myocardial infarction (AMI) patients compared to healthy controls and angina patients, with an area under the receiver operating characteristic curve of 0.862 [Liu et al. DOI:10.1016/j.gene.2024.148142].