Basic Information
Symbol
circPRDM5
RNA Class
circRNA
Alias
PR/SET Domain 5
PFM2
PR Domain Zinc Finger Protein 5
PR Domain Containing 5
PR Domain 5
PR Domain-Containing Protein 5
EC 2.1.1.-
BCS2
Location (GRCh37)
4:121490374-121843078
UCSC Genome Browser
Location (GRCh38)
4:120569219-120921923
Host gene
PRDM5
Host category
mRNA
Forensic tag(s)
Sudden cardiac death diagnosis
External database
Transcripts
| ID | Type | Location (GRCh37) | Location (GRCh38) | Length | GC content |
|---|---|---|---|---|---|
| hsa_chr4_0090900 | Intergenic-Intergenic | chr4:121782448-121782739 | chr4:120861293-120861584 | 292 nt | 0.3836 |
| hsa_PRDM5_0010800 | Intron-Exon-Intron | chr4:121824096-121828712 | chr4:120902941-120907557 | 250 nt | 0.3880 |
| hsa_PRDM5_0011000 | Intron-Exon-Intron | chr4:121824416-121828712 | chr4:120903261-120907557 | 216 nt | 0.4722 |
| hsa_PRDM5_0011100 | Intron-Exon-Intron | chr4:121825702-121834540 | chr4:120904547-120913385 | 279 nt | 0.4552 |
| hsa_PRDM5_0011300 | Intron-Exon-Intron | chr4:121828077-121828712 | chr4:120906922-120907557 | 164 nt | 0.3902 |
| hsa_PRDM5_0011200 | Intron-Exon-Intron | chr4:121828077-121834540 | chr4:120906922-120913385 | 250 nt | 0.3000 |
| hsa_PRDM5_0011400 | Intron-Exon-Intron | chr4:121828629-121834540 | chr4:120907474-120913385 | 215 nt | 0.4698 |
| hsa_PRDM5_0011500 | Intron-Intron | chr4:121842468-121843078 | chr4:120921313-120921923 | 611 nt | 0.4173 |
Showing 111 to 118 of 118 entries
Forensic Context
A study in humans demonstrated that serum levels of circPRDM5 were significantly decreased in acute myocardial infarction (AMI) patients compared to healthy controls and angina patients, with an area under the receiver operating characteristic curve of 0.862 [Liu et al. DOI:10.1016/j.gene.2024.148142].