Basic Information

Symbol
circPRDM5
RNA Class
circRNA
Alias
PR/SET Domain 5 PFM2 PR Domain Zinc Finger Protein 5 PR Domain Containing 5 PR Domain 5 PR Domain-Containing Protein 5 EC 2.1.1.- BCS2
Location (GRCh37)
4:121490374-121843078 UCSC Genome Browser
Location (GRCh38)
4:120569219-120921923
UCSC Genome Browser Search in Marker Scope
Host gene
PRDM5
Host category
mRNA
Forensic tag(s)
Sudden cardiac death diagnosis
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_PRDM5_0005600 Exon-Exon chr4:121698343-121732604 chr4:120777188-120811449 672 nt 0.3929
hsa_PRDM5_0005700 Exon-Exon chr4:121698343-121742500 chr4:120777188-120821345 1237 nt 0.4220
hsa_PRDM5_0006700 Exon-Exon chr4:121702298-121732604 chr4:120781143-120811449 578 nt 0.3824
hsa_PRDM5_0007500 Exon-Exon chr4:121719422-121742500 chr4:120798267-120821345 888 nt 0.4200
hsa_PRDM5_0008700 Exon-Exon chr4:121732525-121742500 chr4:120811370-120821345 645 nt 0.4450
hsa_PRDM5_0010900 Intron-Exon-Intron chr4:121824416-121834540 chr4:120903261-120913385 250 nt 0.3880
hsa_PRDM5_0000100 Intergenic-Exon chr4:121490374-121606180 chr4:120569219-120685025 250 nt 0.2400
hsa_PRDM5_0000400 Intergenic-Exon chr4:121579081-121606180 chr4:120657926-120685025 134 nt 0.3582
hsa_PRDM5_0000300 Intergenic-Exon chr4:121579081-121675793 chr4:120657926-120754638 250 nt 0.3120
hsa_PRDM5_0000500 Intergenic-Exon chr4:121583242-121606180 chr4:120662087-120685025 250 nt 0.2440
Showing 11 to 20 of 118 entries
Forensic Context

A study in humans demonstrated that serum levels of circPRDM5 were significantly decreased in acute myocardial infarction (AMI) patients compared to healthy controls and angina patients, with an area under the receiver operating characteristic curve of 0.862 [Liu et al. DOI:10.1016/j.gene.2024.148142].