Basic Information

Symbol
circPRDM5
RNA Class
circRNA
Alias
PR/SET Domain 5 PFM2 PR Domain Zinc Finger Protein 5 PR Domain Containing 5 PR Domain 5 PR Domain-Containing Protein 5 EC 2.1.1.- BCS2
Location (GRCh37)
4:121490374-121843078 UCSC Genome Browser
Location (GRCh38)
4:120569219-120921923
UCSC Genome Browser Search in Marker Scope
Host gene
PRDM5
Host category
mRNA
Forensic tag(s)
Sudden cardiac death diagnosis
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_chr4_0090400 Intergenic-Intergenic chr4:121605186-121606730 chr4:120684031-120685575 1545 nt 0.3074
hsa_PRDM5_0001200 Intergenic-Exon chr4:121606075-121631568 chr4:120684920-120710413 211 nt 0.4313
hsa_PRDM5_0000800 Intergenic-Intron chr4:121606075-121677297 chr4:120684920-120756142 250 nt 0.3120
hsa_PRDM5_0001300 Intergenic-Exon chr4:121606075-121706246 chr4:120684920-120785091 94 nt 0.4362
hsa_PRDM5_0001400 Intergenic-Exon chr4:121606075-121720900 chr4:120684920-120799745 179 nt 0.3799
hsa_PRDM5_0001500 Intergenic-Exon chr4:121606075-121732604 chr4:120684920-120811449 271 nt 0.3321
hsa_PRDM5_0000900 Intergenic-Exon chr4:121606075-121737729 chr4:120684920-120816574 250 nt 0.3480
hsa_PRDM5_0001000 Intergenic-Exon chr4:121606075-121742472 chr4:120684920-120821317 250 nt 0.3000
hsa_PRDM5_0001100 Intergenic-Exon chr4:121606075-121742500 chr4:120684920-120821345 250 nt 0.3040
hsa_chr4_0090500 Intergenic-Intergenic chr4:121606395-121606730 chr4:120685240-120685575 336 nt 0.2976
Showing 21 to 30 of 118 entries
Forensic Context

A study in humans demonstrated that serum levels of circPRDM5 were significantly decreased in acute myocardial infarction (AMI) patients compared to healthy controls and angina patients, with an area under the receiver operating characteristic curve of 0.862 [Liu et al. DOI:10.1016/j.gene.2024.148142].