Basic Information

Symbol
circPRDM5
RNA Class
circRNA
Alias
PR/SET Domain 5 PFM2 PR Domain Zinc Finger Protein 5 PR Domain Containing 5 PR Domain 5 PR Domain-Containing Protein 5 EC 2.1.1.- BCS2
Location (GRCh37)
4:121490374-121843078 UCSC Genome Browser
Location (GRCh38)
4:120569219-120921923
UCSC Genome Browser Search in Marker Scope
Host gene
PRDM5
Host category
mRNA
Forensic tag(s)
Sudden cardiac death diagnosis
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_chr4_0090600 Intergenic-Intergenic chr4:121606409-121606730 chr4:120685254-120685575 322 nt 0.2888
hsa_PRDM5_0001600 Intron-Exon-Intron chr4:121618859-121732604 chr4:120697704-120811449 250 nt 0.3240
hsa_PRDM5_0001700 Intron-Exon-Intron chr4:121631460-121732604 chr4:120710305-120811449 1040 nt 0.4317
hsa_PRDM5_0002200 Intron-Exon-Intron chr4:121631464-121733969 chr4:120710309-120812814 2228 nt 0.3573
hsa_PRDM5_0002400 Exon-Exon chr4:121631464-121737729 chr4:120710309-120816574 128 nt 0.5313
hsa_PRDM5_0002500 Exon-Exon chr4:121631464-121742472 chr4:120710309-120821317 147 nt 0.4286
hsa_PRDM5_0002600 Intron-Exon-Intron chr4:121631464-121745254 chr4:120710309-120824099 197 nt 0.4822
hsa_PRDM5_0002700 Exon-Exon chr4:121631464-121774695 chr4:120710309-120853540 123 nt 0.5041
hsa_PRDM5_0002300 Exon-Exon chr4:121631464-121828712 chr4:120710309-120907557 1635 nt 0.4379
hsa_PRDM5_0002900 Exon-Exon chr4:121652773-121675793 chr4:120731618-120754638 259 nt 0.4865
Showing 31 to 40 of 118 entries
Forensic Context

A study in humans demonstrated that serum levels of circPRDM5 were significantly decreased in acute myocardial infarction (AMI) patients compared to healthy controls and angina patients, with an area under the receiver operating characteristic curve of 0.862 [Liu et al. DOI:10.1016/j.gene.2024.148142].