Basic Information

Symbol
circPRDM5
RNA Class
circRNA
Alias
PR/SET Domain 5 PFM2 PR Domain Zinc Finger Protein 5 PR Domain Containing 5 PR Domain 5 PR Domain-Containing Protein 5 EC 2.1.1.- BCS2
Location (GRCh37)
4:121490374-121843078 UCSC Genome Browser
Location (GRCh38)
4:120569219-120921923
UCSC Genome Browser Search in Marker Scope
Host gene
PRDM5
Host category
mRNA
Forensic tag(s)
Sudden cardiac death diagnosis
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_PRDM5_0003000 Exon-Exon chr4:121652773-121706246 chr4:120731618-120785091 608 nt 0.4523
hsa_PRDM5_0003200 Exon-Exon chr4:121652773-121732604 chr4:120731618-120811449 80 nt 0.3625
hsa_PRDM5_0002800 Intron-Exon-Intron chr4:121652773-121733969 chr4:120731618-120812814 2296 nt 0.3606
hsa_PRDM5_0003100 Exon-Exon chr4:121652773-121737729 chr4:120731618-120816574 1053 nt 0.4330
hsa_PRDM5_0003300 Exon-Exon chr4:121652773-121742500 chr4:120731618-120821345 175 nt 0.4171
hsa_PRDM5_0003500 Exon-Exon chr4:121652862-121732604 chr4:120731707-120811449 86 nt 0.3721
hsa_PRDM5_0003400 Exon-Exon chr4:121652862-121742500 chr4:120731707-120821345 1664 nt 0.4189
hsa_PRDM5_0003600 Intron-Exon-Intron chr4:121668727-121677297 chr4:120747572-120756142 184 nt 0.4565
hsa_PRDM5_0003700 Intron-Exon-Intron chr4:121668727-121732604 chr4:120747572-120811449 86 nt 0.4302
hsa_PRDM5_0004500 Intron-Exon-Intron chr4:121675708-121682001 chr4:120754553-120760846 77 nt 0.3636
Showing 41 to 50 of 118 entries
Forensic Context

A study in humans demonstrated that serum levels of circPRDM5 were significantly decreased in acute myocardial infarction (AMI) patients compared to healthy controls and angina patients, with an area under the receiver operating characteristic curve of 0.862 [Liu et al. DOI:10.1016/j.gene.2024.148142].