Basic Information

Symbol
circPRDM5
RNA Class
circRNA
Alias
PR/SET Domain 5 PFM2 PR Domain Zinc Finger Protein 5 PR Domain Containing 5 PR Domain 5 PR Domain-Containing Protein 5 EC 2.1.1.- BCS2
Location (GRCh37)
4:121490374-121843078 UCSC Genome Browser
Location (GRCh38)
4:120569219-120921923
UCSC Genome Browser Search in Marker Scope
Host gene
PRDM5
Host category
mRNA
Forensic tag(s)
Sudden cardiac death diagnosis
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_PRDM5_0004600 Exon-Exon chr4:121675708-121698436 chr4:120754553-120777281 86 nt 0.4302
hsa_PRDM5_0004300 Exon-Exon chr4:121675708-121719579 chr4:120754553-120798424 593 nt 0.4132
hsa_PRDM5_0004700 Exon-Exon chr4:121675708-121720900 chr4:120754553-120799745 91 nt 0.3407
hsa_PRDM5_0004800 Intron-Exon-Intron chr4:121675708-121733969 chr4:120754553-120812814 92 nt 0.4130
hsa_PRDM5_0004900 Exon-Exon chr4:121675708-121737854 chr4:120754553-120816699 242 nt 0.3967
hsa_PRDM5_0004400 Exon-Exon chr4:121675708-121739682 chr4:120754553-120818527 1148 nt 0.4233
hsa_PRDM5_0005000 Exon-Exon chr4:121675708-121742472 chr4:120754553-120821317 233 nt 0.4292
hsa_PRDM5_0005100 Intron-Exon-Intron chr4:121675708-121769652 chr4:120754553-120848497 86 nt 0.4302
hsa_PRDM5_0005200 Exon-Exon chr4:121675708-121774695 chr4:120754553-120853540 303 nt 0.4686
hsa_PRDM5_0005300 Intron-Intron chr4:121681925-121688769 chr4:120760770-120767614 177 nt 0.3616
Showing 51 to 60 of 118 entries
Forensic Context

A study in humans demonstrated that serum levels of circPRDM5 were significantly decreased in acute myocardial infarction (AMI) patients compared to healthy controls and angina patients, with an area under the receiver operating characteristic curve of 0.862 [Liu et al. DOI:10.1016/j.gene.2024.148142].