Basic Information

Symbol
circPRDM5
RNA Class
circRNA
Alias
PR/SET Domain 5 PFM2 PR Domain Zinc Finger Protein 5 PR Domain Containing 5 PR Domain 5 PR Domain-Containing Protein 5 EC 2.1.1.- BCS2
Location (GRCh37)
4:121490374-121843078 UCSC Genome Browser
Location (GRCh38)
4:120569219-120921923
UCSC Genome Browser Search in Marker Scope
Host gene
PRDM5
Host category
mRNA
Forensic tag(s)
Sudden cardiac death diagnosis
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_PRDM5_0005400 Intron-Exon-Intron chr4:121681925-121732604 chr4:120760770-120811449 157 nt 0.3631
hsa_PRDM5_0005900 Exon-Exon chr4:121698343-121706174 chr4:120777188-120785019 277 nt 0.4188
hsa_PRDM5_0006100 Exon-Exon chr4:121698343-121720900 chr4:120777188-120799745 91 nt 0.3297
hsa_PRDM5_0006200 Exon-Exon chr4:121698343-121737729 chr4:120777188-120816574 255 nt 0.4235
hsa_PRDM5_0006000 Exon-Exon chr4:121698343-121737854 chr4:120777188-120816699 919 nt 0.4157
hsa_PRDM5_0006300 Exon-Exon chr4:121698343-121742472 chr4:120777188-120821317 94 nt 0.4574
hsa_PRDM5_0006400 Intron-Exon-Intron chr4:121698343-121742522 chr4:120777188-120821367 100 nt 0.4400
hsa_PRDM5_0005800 Intron-Exon-Intron chr4:121698343-121769652 chr4:120777188-120848497 250 nt 0.3320
hsa_PRDM5_0006500 Exon-Exon chr4:121698343-121774695 chr4:120777188-120853540 100 nt 0.4600
hsa_PRDM5_0006600 Exon-Exon chr4:121698343-121828712 chr4:120777188-120907557 178 nt 0.4551
Showing 61 to 70 of 118 entries
Forensic Context

A study in humans demonstrated that serum levels of circPRDM5 were significantly decreased in acute myocardial infarction (AMI) patients compared to healthy controls and angina patients, with an area under the receiver operating characteristic curve of 0.862 [Liu et al. DOI:10.1016/j.gene.2024.148142].