Basic Information

Symbol
circPRDM5
RNA Class
circRNA
Alias
PR/SET Domain 5 PFM2 PR Domain Zinc Finger Protein 5 PR Domain Containing 5 PR Domain 5 PR Domain-Containing Protein 5 EC 2.1.1.- BCS2
Location (GRCh37)
4:121490374-121843078 UCSC Genome Browser
Location (GRCh38)
4:120569219-120921923
UCSC Genome Browser Search in Marker Scope
Host gene
PRDM5
Host category
mRNA
Forensic tag(s)
Sudden cardiac death diagnosis
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_PRDM5_0006800 Exon-Exon chr4:121702298-121738079 chr4:120781143-120816924 793 nt 0.4149
hsa_PRDM5_0006900 Exon-Exon chr4:121706153-121732604 chr4:120784998-120811449 94 nt 0.4362
hsa_PRDM5_0007000 Exon-Exon chr4:121706153-121742500 chr4:120784998-120821345 94 nt 0.4362
hsa_PRDM5_0007100 Intron-Exon-Intron chr4:121713994-121732604 chr4:120792839-120811449 250 nt 0.3440
hsa_PRDM5_0007200 Intron-Exon-Intron chr4:121716365-121720900 chr4:120795210-120799745 85 nt 0.3176
hsa_PRDM5_0007300 Intron-Exon-Intron chr4:121716365-121732604 chr4:120795210-120811449 67 nt 0.4328
hsa_PRDM5_0007400 Intron-Exon-Intron chr4:121716365-121742500 chr4:120795210-120821345 225 nt 0.3911
hsa_PRDM5_0007700 Exon-Exon chr4:121719422-121732604 chr4:120798267-120811449 356 nt 0.3483
hsa_PRDM5_0007800 Exon-Exon chr4:121719422-121742472 chr4:120798267-120821317 177 nt 0.3390
hsa_PRDM5_0007900 Exon-Exon chr4:121719422-121742496 chr4:120798267-120821341 1148 nt 0.3920
Showing 71 to 80 of 118 entries
Forensic Context

A study in humans demonstrated that serum levels of circPRDM5 were significantly decreased in acute myocardial infarction (AMI) patients compared to healthy controls and angina patients, with an area under the receiver operating characteristic curve of 0.862 [Liu et al. DOI:10.1016/j.gene.2024.148142].