Basic Information

Symbol
circPRDM5
RNA Class
circRNA
Alias
PR/SET Domain 5 PFM2 PR Domain Zinc Finger Protein 5 PR Domain Containing 5 PR Domain 5 PR Domain-Containing Protein 5 EC 2.1.1.- BCS2
Location (GRCh37)
4:121490374-121843078 UCSC Genome Browser
Location (GRCh38)
4:120569219-120921923
UCSC Genome Browser Search in Marker Scope
Host gene
PRDM5
Host category
mRNA
Forensic tag(s)
Sudden cardiac death diagnosis
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_PRDM5_0008000 Intron-Exon-Intron chr4:121719422-121745254 chr4:120798267-120824099 80 nt 0.5000
hsa_PRDM5_0007600 Intron-Exon-Intron chr4:121719422-121769652 chr4:120798267-120848497 250 nt 0.3120
hsa_PRDM5_0008100 Exon-Exon chr4:121719422-121774695 chr4:120798267-120853540 716 nt 0.4162
hsa_PRDM5_0008200 Intron-Exon-Intron chr4:121719422-121781764 chr4:120798267-120860609 323 nt 0.3560
hsa_PRDM5_0008300 Exon-Exon chr4:121719422-121828712 chr4:120798267-120907557 84 nt 0.4524
hsa_PRDM5_0008400 Intron-Intron chr4:121719652-121720065 chr4:120798497-120798910 414 nt 0.3816
hsa_PRDM5_0008600 Exon-Exon chr4:121720816-121742500 chr4:120799661-120821345 175 nt 0.4171
hsa_PRDM5_0008500 Exon-Exon chr4:121720816-121774695 chr4:120799661-120853540 853 nt 0.4408
hsa_PRDM5_0008800 Exon-Exon chr4:121732525-121739682 chr4:120811370-120818527 295 nt 0.4644
hsa_PRDM5_0008900 Exon-Exon chr4:121732525-121742472 chr4:120811370-120821317 80 nt 0.3625
Showing 81 to 90 of 118 entries
Forensic Context

A study in humans demonstrated that serum levels of circPRDM5 were significantly decreased in acute myocardial infarction (AMI) patients compared to healthy controls and angina patients, with an area under the receiver operating characteristic curve of 0.862 [Liu et al. DOI:10.1016/j.gene.2024.148142].