Basic Information

Symbol
circPTN
RNA Class
circRNA
Alias
Pleiotrophin HBNF HBGF8 NEGF1 Heparin-Binding Neurite Outgrowth-Promoting Factor 1 Heparin-Binding Growth-Associated Molecule Heparin-Binding Growth Factor 8 Heparin-Binding Brain Mitogen Osteoblast-Specific Factor 1 HB-GAM HBGF-8 HBNF-1 OSF-1 HBBM Pleiotrophin (Heparin Binding Growth Factor 8, Neurite Growth-Promoting Factor 1) Heparin-Binding Neurite Outgrowth Promoting Factor Heparin-Binding Neurite Outgrowth-Promoting Factor Neurite Growth-Promoting Factor 1 Heparin Affin Regulatory Protein Heparin Binding Growth Factor 8 HBNF1 HARP
Location (GRCh37)
7:136912106-137028373 UCSC Genome Browser
Location (GRCh38)
7:137227359-137343627
UCSC Genome Browser Search in Marker Scope
Host gene
PTN
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_PTN_0000200 Exon-Exon chr7:136935977-136938384 chr7:137251230-137253637 336 nt 0.5417
hsa_PTN_0000300 Exon-Exon chr7:136935977-136939721 chr7:137251230-137254974 452 nt 0.5265
hsa_PTN_0001600 Intron-Intron chr7:136976683-136976919 chr7:137291936-137292172 237 nt 0.4135
hsa_PTN_0002700 Intron-Intron chr7:137000162-137002025 chr7:137315415-137317278 1864 nt 0.4759
hsa_PTN_0000100 Exon-Exon chr7:136912106-136912406 chr7:137227359-137227659 301 nt 0.2757
hsa_PTN_0000700 Exon-Exon chr7:136935977-136938268 chr7:137251230-137253521 220 nt 0.5318
hsa_PTN_0000800 Exon-Exon chr7:136935977-136939626 chr7:137251230-137254879 357 nt 0.5378
hsa_PTN_0000900 Exon-Exon chr7:136935977-136939714 chr7:137251230-137254967 445 nt 0.5281
hsa_PTN_0000400 Intron-Exon-Intron chr7:136935977-136942620 chr7:137251230-137257873 250 nt 0.3880
hsa_PTN_0000500 Intron-Exon-Intron chr7:136935977-136969515 chr7:137251230-137284768 250 nt 0.3760
Showing 1 to 10 of 29 entries
Forensic Context

A review of circRNA functions in cancer development notes that the circPTN acts as a regulator of stemness in glioma by sponging miR-145-5p and miR-330-5p, which promotes increased levels of stemness markers and tumor growth [Di Agostino et al. DOI:10.3389/fcell.2020.00389].