Basic Information

Symbol
circPTN
RNA Class
circRNA
Alias
Pleiotrophin HBNF HBGF8 NEGF1 Heparin-Binding Neurite Outgrowth-Promoting Factor 1 Heparin-Binding Growth-Associated Molecule Heparin-Binding Growth Factor 8 Heparin-Binding Brain Mitogen Osteoblast-Specific Factor 1 HB-GAM HBGF-8 HBNF-1 OSF-1 HBBM Pleiotrophin (Heparin Binding Growth Factor 8, Neurite Growth-Promoting Factor 1) Heparin-Binding Neurite Outgrowth Promoting Factor Heparin-Binding Neurite Outgrowth-Promoting Factor Neurite Growth-Promoting Factor 1 Heparin Affin Regulatory Protein Heparin Binding Growth Factor 8 HBNF1 HARP
Location (GRCh37)
7:136912106-137028373 UCSC Genome Browser
Location (GRCh38)
7:137227359-137343627
UCSC Genome Browser Search in Marker Scope
Host gene
PTN
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_PTN_0001000 Intron-Exon-Intron chr7:136935977-136976919 chr7:137251230-137292172 33 nt 0.5758
hsa_chr7_0177200 Intergenic-Intergenic chr7:136935983-136938263 chr7:137251236-137253516 209 nt 0.5359
hsa_PTN_0001200 Exon-Exon chr7:136938211-136939721 chr7:137253464-137254974 174 nt 0.5345
hsa_PTN_0001300 Exon-Exon chr7:136939606-137028373 chr7:137254859-137343627 116 nt 0.4828
hsa_chr7_0177300 Intergenic-Intergenic chr7:136947252-136947512 chr7:137262505-137262765 261 nt 0.5249
hsa_PTN_0001400 Intron-Intron chr7:136969437-136976919 chr7:137284690-137292172 250 nt 0.3320
hsa_PTN_0001500 Intron-Intron chr7:136975358-136976864 chr7:137290611-137292117 1507 nt 0.3577
hsa_chr7_0177400 Intergenic-Intergenic chr7:136975400-136976488 chr7:137290653-137291741 1089 nt 0.3526
hsa_PTN_0001900 Intron-Intron chr7:136976683-136977958 chr7:137291936-137293211 95 nt 0.4000
hsa_PTN_0001800 Intron-Intron chr7:136976683-136978256 chr7:137291936-137293509 1574 nt 0.3977
Showing 11 to 20 of 29 entries
Forensic Context

A review of circRNA functions in cancer development notes that the circPTN acts as a regulator of stemness in glioma by sponging miR-145-5p and miR-330-5p, which promotes increased levels of stemness markers and tumor growth [Di Agostino et al. DOI:10.3389/fcell.2020.00389].