Basic Information

Symbol
circPVT1
RNA Class
circRNA
Alias
Pvt1 Oncogene Onco-LncRNA-100 NCRNA00079 LINC00079 MIR1204HG TP53LC09 Pvt-1 (Murine) Oncogene Homolog, MYC Activator Long Intergenic Non-Protein Coding RNA 79 Plasmacytoma Variant Translocation 1 Pvt1 Oncogene (Non-Protein Coding) HLA-A24 Ligand (HWNDTRPAHF, HF10) MIR1204, MIR1205, MIR1206 And MIR1207 Host Gene MIR1204, MIR1205, MIR1206 And MIR1207 Host Oncogene PVT-1 (MYC Activator) Pvt1 Oncogene Homolog (Mouse) Non-Protein Coding RNA 79 RP11-89K10/PVT1 Fusion HIST1H2BD/PVT1 Fusion PVT1/LINC00824 Fusion PVT1/IRF2BP2 Fusion PVT1/CCDC26 Fusion PVT1/NSMCE2 Fusion CXCR4/PVT1 Fusion PVT1/CASC8 Fusion PVT1/IFRD1 Fusion PVT1/NFIL3 Fusion PVT1/SPRY2 Fusion PVT1/MYC Fusion PVT1/UBB Fusion NONHSAG051258.2 HSALNG0068477 PVT1
Location (GRCh37)
8:128806779-129117437 UCSC Genome Browser
Location (GRCh38)
8:127794533-128105191
UCSC Genome Browser Search in Marker Scope
Host gene
PVT1
Host category
lncRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_PVT1_0000100 Exon-Intergenic chr8:128806779-128903244 chr8:127794533-127890998 777 nt 0.5676
hsa_PVT1_0000200 Intergenic-Exon chr8:128806779-129001537 chr8:127794533-127989291 1377 nt 0.5432
hsa_PVT1_0000300 Intergenic-Exon chr8:128806779-129082518 chr8:127794533-128070272 1490 nt 0.5430
hsa_PVT1_0001200 Intron-Exon-Intron chr8:128867401-128903244 chr8:127855155-127890998 575 nt 0.5165
hsa_PVT1_0001300 Intergenic-Exon chr8:128867401-129082518 chr8:127855155-128070272 1288 nt 0.5163
hsa_PVT1_0001600 Exon-Exon chr8:128902835-128903244 chr8:127890589-127890998 410 nt 0.5073
hsa_PVT1_0001700 Exon-Exon chr8:128902835-128951922 chr8:127890589-127939676 579 nt 0.5199
hsa_PVT1_0001800 Intergenic-Exon chr8:128902835-128996450 chr8:127890589-127984204 880 nt 0.5261
hsa_PVT1_0001900 Intergenic-Exon chr8:128902835-129001537 chr8:127890589-127989291 1010 nt 0.5099
hsa_PVT1_0002000 Intergenic-Exon chr8:128902835-129082518 chr8:127890589-128070272 1123 nt 0.5129
Showing 1 to 10 of 91 entries
Forensic Context

A review of circular RNAs in human development and diseases notes that the circPVT1 is upregulated in gastric cancer and correlates with its function as a sponge for miR-125 [Lee et al. DOI:10.1016/j.biopha.2018.12.052]. Another review on circRNAs in embryogenesis and cancer development reports that the circPVT1 has pro-oncogenic activities in acute myeloid leukemia and head and neck squamous cell carcinoma, with its expression significantly associated with mutant p53 [Di Agostino et al. DOI:10.3389/fcell.2020.00389].