Basic Information

Symbol
circPVT1
RNA Class
circRNA
Alias
Pvt1 Oncogene Onco-LncRNA-100 NCRNA00079 LINC00079 MIR1204HG TP53LC09 Pvt-1 (Murine) Oncogene Homolog, MYC Activator Long Intergenic Non-Protein Coding RNA 79 Plasmacytoma Variant Translocation 1 Pvt1 Oncogene (Non-Protein Coding) HLA-A24 Ligand (HWNDTRPAHF, HF10) MIR1204, MIR1205, MIR1206 And MIR1207 Host Gene MIR1204, MIR1205, MIR1206 And MIR1207 Host Oncogene PVT-1 (MYC Activator) Pvt1 Oncogene Homolog (Mouse) Non-Protein Coding RNA 79 RP11-89K10/PVT1 Fusion HIST1H2BD/PVT1 Fusion PVT1/LINC00824 Fusion PVT1/IRF2BP2 Fusion PVT1/CCDC26 Fusion PVT1/NSMCE2 Fusion CXCR4/PVT1 Fusion PVT1/CASC8 Fusion PVT1/IFRD1 Fusion PVT1/NFIL3 Fusion PVT1/SPRY2 Fusion PVT1/MYC Fusion PVT1/UBB Fusion NONHSAG051258.2 HSALNG0068477 PVT1
Location (GRCh37)
8:128806779-129117437 UCSC Genome Browser
Location (GRCh38)
8:127794533-128105191
UCSC Genome Browser Search in Marker Scope
Host gene
PVT1
Host category
lncRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_PVT1_0002700 Exon-Exon chr8:128951754-128951922 chr8:127939508-127939676 169 nt 0.5503
hsa_PVT1_0002800 Exon-Exon chr8:128951754-129001537 chr8:127939508-127989291 600 nt 0.5117
hsa_PVT1_0002900 Exon-Exon chr8:128951754-129082518 chr8:127939508-128070272 713 nt 0.5161
hsa_PVT1_0003000 Exon-Exon chr8:128951754-129108900 chr8:127939508-128096654 850 nt 0.5212
hsa_PVT1_0003200 Exon-Exon chr8:128951754-129113499 chr8:127939508-128101253 1124 nt 0.5160
hsa_PVT1_0004200 Exon-Exon chr8:128996150-129001537 chr8:127983904-127989291 431 nt 0.4965
hsa_PVT1_0004300 Exon-Exon chr8:128996150-129082518 chr8:127983904-128070272 544 nt 0.5055
hsa_PVT1_0004400 Exon-Exon chr8:128996150-129108900 chr8:127983904-128096654 681 nt 0.5140
hsa_PVT1_0005300 Intron-Exon-Intron chr8:129001408-129022690 chr8:127989162-128010444 250 nt 0.3280
hsa_PVT1_0004800 Exon-Exon chr8:129001408-129082518 chr8:127989162-128070272 243 nt 0.4650
Showing 11 to 20 of 91 entries
Forensic Context

A review of circular RNAs in human development and diseases notes that the circPVT1 is upregulated in gastric cancer and correlates with its function as a sponge for miR-125 [Lee et al. DOI:10.1016/j.biopha.2018.12.052]. Another review on circRNAs in embryogenesis and cancer development reports that the circPVT1 has pro-oncogenic activities in acute myeloid leukemia and head and neck squamous cell carcinoma, with its expression significantly associated with mutant p53 [Di Agostino et al. DOI:10.3389/fcell.2020.00389].