Basic Information

Symbol
circPVT1
RNA Class
circRNA
Alias
Pvt1 Oncogene Onco-LncRNA-100 NCRNA00079 LINC00079 MIR1204HG TP53LC09 Pvt-1 (Murine) Oncogene Homolog, MYC Activator Long Intergenic Non-Protein Coding RNA 79 Plasmacytoma Variant Translocation 1 Pvt1 Oncogene (Non-Protein Coding) HLA-A24 Ligand (HWNDTRPAHF, HF10) MIR1204, MIR1205, MIR1206 And MIR1207 Host Gene MIR1204, MIR1205, MIR1206 And MIR1207 Host Oncogene PVT-1 (MYC Activator) Pvt1 Oncogene Homolog (Mouse) Non-Protein Coding RNA 79 RP11-89K10/PVT1 Fusion HIST1H2BD/PVT1 Fusion PVT1/LINC00824 Fusion PVT1/IRF2BP2 Fusion PVT1/CCDC26 Fusion PVT1/NSMCE2 Fusion CXCR4/PVT1 Fusion PVT1/CASC8 Fusion PVT1/IFRD1 Fusion PVT1/NFIL3 Fusion PVT1/SPRY2 Fusion PVT1/MYC Fusion PVT1/UBB Fusion NONHSAG051258.2 HSALNG0068477 PVT1
Location (GRCh37)
8:128806779-129117437 UCSC Genome Browser
Location (GRCh38)
8:127794533-128105191
UCSC Genome Browser Search in Marker Scope
Host gene
PVT1
Host category
lncRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_PVT1_0000600 Intron-Intron chr8:128818615-128820108 chr8:127806369-127807862 1494 nt 0.4337
hsa_PVT1_0000700 Intron-Exon-Intron chr8:128824002-128903244 chr8:127811756-127890998 250 nt 0.4160
hsa_chr8_0113800 Intergenic-Intergenic chr8:128827904-128828069 chr8:127815658-127815823 166 nt 0.3434
hsa_PVT1_0000800 Intron-Exon-Intron chr8:128829074-128903244 chr8:127816828-127890998 250 nt 0.4080
hsa_chr8_0114000 Intergenic-Intergenic chr8:128849057-128849559 chr8:127836811-127837313 503 nt 0.5606
hsa_PVT1_0000900 Intron-Intron chr8:128850881-128851098 chr8:127838635-127838852 218 nt 0.3853
hsa_chr8_0114100 Intergenic-Intergenic chr8:128854761-128855348 chr8:127842515-127843102 588 nt 0.5068
hsa_PVT1_0001000 Intron-Exon-Intron chr8:128861504-128903244 chr8:127849258-127890998 250 nt 0.4200
hsa_PVT1_0001100 Intron-Exon chr8:128867401-128951922 chr8:127855155-127939676 250 nt 0.4120
hsa_PVT1_0001400 Intron-Exon-Intron chr8:128867409-128903244 chr8:127855163-127890998 567 nt 0.5168
Showing 31 to 40 of 91 entries
Forensic Context

A review of circular RNAs in human development and diseases notes that the circPVT1 is upregulated in gastric cancer and correlates with its function as a sponge for miR-125 [Lee et al. DOI:10.1016/j.biopha.2018.12.052]. Another review on circRNAs in embryogenesis and cancer development reports that the circPVT1 has pro-oncogenic activities in acute myeloid leukemia and head and neck squamous cell carcinoma, with its expression significantly associated with mutant p53 [Di Agostino et al. DOI:10.3389/fcell.2020.00389].