Basic Information

Symbol
circPVT1
RNA Class
circRNA
Alias
Pvt1 Oncogene Onco-LncRNA-100 NCRNA00079 LINC00079 MIR1204HG TP53LC09 Pvt-1 (Murine) Oncogene Homolog, MYC Activator Long Intergenic Non-Protein Coding RNA 79 Plasmacytoma Variant Translocation 1 Pvt1 Oncogene (Non-Protein Coding) HLA-A24 Ligand (HWNDTRPAHF, HF10) MIR1204, MIR1205, MIR1206 And MIR1207 Host Gene MIR1204, MIR1205, MIR1206 And MIR1207 Host Oncogene PVT-1 (MYC Activator) Pvt1 Oncogene Homolog (Mouse) Non-Protein Coding RNA 79 RP11-89K10/PVT1 Fusion HIST1H2BD/PVT1 Fusion PVT1/LINC00824 Fusion PVT1/IRF2BP2 Fusion PVT1/CCDC26 Fusion PVT1/NSMCE2 Fusion CXCR4/PVT1 Fusion PVT1/CASC8 Fusion PVT1/IFRD1 Fusion PVT1/NFIL3 Fusion PVT1/SPRY2 Fusion PVT1/MYC Fusion PVT1/UBB Fusion NONHSAG051258.2 HSALNG0068477 PVT1
Location (GRCh37)
8:128806779-129117437 UCSC Genome Browser
Location (GRCh38)
8:127794533-128105191
UCSC Genome Browser Search in Marker Scope
Host gene
PVT1
Host category
lncRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_chr8_0114300 Intergenic-Intergenic chr8:128868735-128869298 chr8:127856489-127857052 564 nt 0.4894
hsa_PVT1_0001500 Intron-Exon-Intron chr8:128879685-128903244 chr8:127867439-127890998 250 nt 0.4600
hsa_PVT1_0002100 Intron-Exon-Intron chr8:128902835-128914785 chr8:127890589-127902539 250 nt 0.3440
hsa_PVT1_0002300 Intron-Intron chr8:128907625-128912382 chr8:127895379-127900136 250 nt 0.3920
hsa_PVT1_0002400 Intron-Intron chr8:128907669-128912323 chr8:127895423-127900077 250 nt 0.2560
hsa_PVT1_0002500 Intron-Intron chr8:128921287-128922413 chr8:127909041-127910167 1127 nt 0.5040
hsa_PVT1_0002600 Intron-Exon chr8:128949535-128951922 chr8:127937289-127939676 2388 nt 0.5054
hsa_PVT1_0003100 Intron-Exon-Intron chr8:128951754-129022690 chr8:127939508-128010444 425 nt 0.4729
hsa_PVT1_0003300 Intron-Intron chr8:128954843-128955120 chr8:127942597-127942874 278 nt 0.4784
hsa_PVT1_0003400 Intron-Intron chr8:128955463-128955702 chr8:127943217-127943456 240 nt 0.3792
Showing 41 to 50 of 91 entries
Forensic Context

A review of circular RNAs in human development and diseases notes that the circPVT1 is upregulated in gastric cancer and correlates with its function as a sponge for miR-125 [Lee et al. DOI:10.1016/j.biopha.2018.12.052]. Another review on circRNAs in embryogenesis and cancer development reports that the circPVT1 has pro-oncogenic activities in acute myeloid leukemia and head and neck squamous cell carcinoma, with its expression significantly associated with mutant p53 [Di Agostino et al. DOI:10.3389/fcell.2020.00389].