Basic Information

Symbol
circPVT1
RNA Class
circRNA
Alias
Pvt1 Oncogene Onco-LncRNA-100 NCRNA00079 LINC00079 MIR1204HG TP53LC09 Pvt-1 (Murine) Oncogene Homolog, MYC Activator Long Intergenic Non-Protein Coding RNA 79 Plasmacytoma Variant Translocation 1 Pvt1 Oncogene (Non-Protein Coding) HLA-A24 Ligand (HWNDTRPAHF, HF10) MIR1204, MIR1205, MIR1206 And MIR1207 Host Gene MIR1204, MIR1205, MIR1206 And MIR1207 Host Oncogene PVT-1 (MYC Activator) Pvt1 Oncogene Homolog (Mouse) Non-Protein Coding RNA 79 RP11-89K10/PVT1 Fusion HIST1H2BD/PVT1 Fusion PVT1/LINC00824 Fusion PVT1/IRF2BP2 Fusion PVT1/CCDC26 Fusion PVT1/NSMCE2 Fusion CXCR4/PVT1 Fusion PVT1/CASC8 Fusion PVT1/IFRD1 Fusion PVT1/NFIL3 Fusion PVT1/SPRY2 Fusion PVT1/MYC Fusion PVT1/UBB Fusion NONHSAG051258.2 HSALNG0068477 PVT1
Location (GRCh37)
8:128806779-129117437 UCSC Genome Browser
Location (GRCh38)
8:127794533-128105191
UCSC Genome Browser Search in Marker Scope
Host gene
PVT1
Host category
lncRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_PVT1_0003500 Intron-Intron chr8:128981346-128981740 chr8:127969100-127969494 395 nt 0.4506
hsa_PVT1_0003600 Intron-Exon-Intron chr8:128981662-129001537 chr8:127969416-127989291 130 nt 0.4000
hsa_PVT1_0003700 Intron-Exon-Intron chr8:128981662-129022690 chr8:127969416-128010444 508 nt 0.4488
hsa_PVT1_0003800 Intron-Exon-Intron chr8:128988469-129021964 chr8:127976223-128009718 250 nt 0.3880
hsa_PVT1_0003900 Intron-Exon-Intron chr8:128994606-129001537 chr8:127982360-127989291 120 nt 0.5000
hsa_PVT1_0004000 Intron-Exon-Intron chr8:128994606-129022690 chr8:127982360-128010444 133 nt 0.4135
hsa_PVT1_0004100 Intron-Intron chr8:128995540-128995716 chr8:127983294-127983470 177 nt 0.3955
hsa_PVT1_0004500 Intron-Exon-Intron chr8:128996150-129005185 chr8:127983904-127992939 301 nt 0.5382
hsa_PVT1_0004600 Intron-Exon-Intron chr8:128996150-129005297 chr8:127983904-127993051 71 nt 0.4366
hsa_PVT1_0004700 Intron-Exon-Intron chr8:128996150-129022690 chr8:127983904-128010444 127 nt 0.4173
Showing 51 to 60 of 91 entries
Forensic Context

A review of circular RNAs in human development and diseases notes that the circPVT1 is upregulated in gastric cancer and correlates with its function as a sponge for miR-125 [Lee et al. DOI:10.1016/j.biopha.2018.12.052]. Another review on circRNAs in embryogenesis and cancer development reports that the circPVT1 has pro-oncogenic activities in acute myeloid leukemia and head and neck squamous cell carcinoma, with its expression significantly associated with mutant p53 [Di Agostino et al. DOI:10.3389/fcell.2020.00389].