Basic Information

Symbol
circPVT1
RNA Class
circRNA
Alias
Pvt1 Oncogene Onco-LncRNA-100 NCRNA00079 LINC00079 MIR1204HG TP53LC09 Pvt-1 (Murine) Oncogene Homolog, MYC Activator Long Intergenic Non-Protein Coding RNA 79 Plasmacytoma Variant Translocation 1 Pvt1 Oncogene (Non-Protein Coding) HLA-A24 Ligand (HWNDTRPAHF, HF10) MIR1204, MIR1205, MIR1206 And MIR1207 Host Gene MIR1204, MIR1205, MIR1206 And MIR1207 Host Oncogene PVT-1 (MYC Activator) Pvt1 Oncogene Homolog (Mouse) Non-Protein Coding RNA 79 RP11-89K10/PVT1 Fusion HIST1H2BD/PVT1 Fusion PVT1/LINC00824 Fusion PVT1/IRF2BP2 Fusion PVT1/CCDC26 Fusion PVT1/NSMCE2 Fusion CXCR4/PVT1 Fusion PVT1/CASC8 Fusion PVT1/IFRD1 Fusion PVT1/NFIL3 Fusion PVT1/SPRY2 Fusion PVT1/MYC Fusion PVT1/UBB Fusion NONHSAG051258.2 HSALNG0068477 PVT1
Location (GRCh37)
8:128806779-129117437 UCSC Genome Browser
Location (GRCh38)
8:127794533-128105191
UCSC Genome Browser Search in Marker Scope
Host gene
PVT1
Host category
lncRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_PVT1_0005200 Intron-Exon-Intron chr8:129001408-129010605 chr8:127989162-127998359 130 nt 0.4000
hsa_PVT1_0005000 Intron-Exon-Intron chr8:129001408-129032965 chr8:127989162-128020719 250 nt 0.3800
hsa_PVT1_0005100 Intron-Exon-Intron chr8:129001408-129060855 chr8:127989162-128048609 250 nt 0.3640
hsa_PVT1_0005400 Intron-Exon-Intron chr8:129001408-129095094 chr8:127989162-128082848 882 nt 0.4456
hsa_PVT1_0005500 Intron-Exon-Intron chr8:129005227-129022690 chr8:127992981-128010444 127 nt 0.4173
hsa_PVT1_0005600 Exon-Exon chr8:129008807-129022690 chr8:127996561-128010444 256 nt 0.4219
hsa_PVT1_0005800 Exon-Exon chr8:129010446-129022687 chr8:127998200-128010441 160 nt 0.4063
hsa_PVT1_0005700 Intron-Exon-Intron chr8:129010446-129032965 chr8:127998200-128020719 250 nt 0.3880
hsa_PVT1_0005900 Intron-Exon-Intron chr8:129021814-129022690 chr8:128009568-128010444 278 nt 0.4029
hsa_PVT1_0006500 Intron-Exon-Intron chr8:129021836-129044518 chr8:128009590-128032272 129 nt 0.4264
Showing 61 to 70 of 91 entries
Forensic Context

A review of circular RNAs in human development and diseases notes that the circPVT1 is upregulated in gastric cancer and correlates with its function as a sponge for miR-125 [Lee et al. DOI:10.1016/j.biopha.2018.12.052]. Another review on circRNAs in embryogenesis and cancer development reports that the circPVT1 has pro-oncogenic activities in acute myeloid leukemia and head and neck squamous cell carcinoma, with its expression significantly associated with mutant p53 [Di Agostino et al. DOI:10.3389/fcell.2020.00389].