Basic Information

Symbol
circPVT1
RNA Class
circRNA
Alias
Pvt1 Oncogene Onco-LncRNA-100 NCRNA00079 LINC00079 MIR1204HG TP53LC09 Pvt-1 (Murine) Oncogene Homolog, MYC Activator Long Intergenic Non-Protein Coding RNA 79 Plasmacytoma Variant Translocation 1 Pvt1 Oncogene (Non-Protein Coding) HLA-A24 Ligand (HWNDTRPAHF, HF10) MIR1204, MIR1205, MIR1206 And MIR1207 Host Gene MIR1204, MIR1205, MIR1206 And MIR1207 Host Oncogene PVT-1 (MYC Activator) Pvt1 Oncogene Homolog (Mouse) Non-Protein Coding RNA 79 RP11-89K10/PVT1 Fusion HIST1H2BD/PVT1 Fusion PVT1/LINC00824 Fusion PVT1/IRF2BP2 Fusion PVT1/CCDC26 Fusion PVT1/NSMCE2 Fusion CXCR4/PVT1 Fusion PVT1/CASC8 Fusion PVT1/IFRD1 Fusion PVT1/NFIL3 Fusion PVT1/SPRY2 Fusion PVT1/MYC Fusion PVT1/UBB Fusion NONHSAG051258.2 HSALNG0068477 PVT1
Location (GRCh37)
8:128806779-129117437 UCSC Genome Browser
Location (GRCh38)
8:127794533-128105191
UCSC Genome Browser Search in Marker Scope
Host gene
PVT1
Host category
lncRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_chr8_0114500 Intergenic-Intergenic chr8:129032171-129032395 chr8:128019925-128020149 225 nt 0.4578
hsa_PVT1_0007200 Intron-Intron chr8:129032562-129032965 chr8:128020316-128020719 404 nt 0.5149
hsa_PVT1_0007300 Intron-Intron chr8:129039771-129049481 chr8:128027525-128037235 250 nt 0.4640
hsa_PVT1_0007400 Intron-Intron chr8:129051163-129057676 chr8:128038917-128045430 250 nt 0.3560
hsa_chr8_0114600 Intergenic-Intergenic chr8:129059232-129059524 chr8:128046986-128047278 293 nt 0.4539
hsa_PVT1_0007500 Intron-Intron chr8:129072410-129073250 chr8:128060164-128061004 841 nt 0.4447
hsa_PVT1_0007800 Intron-Exon-Intron chr8:129082406-129086537 chr8:128070160-128074291 250 nt 0.4320
hsa_PVT1_0008000 Intron-Exon chr8:129085649-129108900 chr8:128073403-128096654 226 nt 0.5310
hsa_PVT1_0008100 Exon-Exon chr8:129094999-129108900 chr8:128082753-128096654 233 nt 0.5021
hsa_PVT1_0008200 Intron-Exon chr8:129102010-129108900 chr8:128089764-128096654 250 nt 0.3840
Showing 81 to 90 of 91 entries
Forensic Context

A review of circular RNAs in human development and diseases notes that the circPVT1 is upregulated in gastric cancer and correlates with its function as a sponge for miR-125 [Lee et al. DOI:10.1016/j.biopha.2018.12.052]. Another review on circRNAs in embryogenesis and cancer development reports that the circPVT1 has pro-oncogenic activities in acute myeloid leukemia and head and neck squamous cell carcinoma, with its expression significantly associated with mutant p53 [Di Agostino et al. DOI:10.3389/fcell.2020.00389].