Basic Information

Symbol
circSNX29
RNA Class
circRNA
Alias
Sorting Nexin 29 RUNDC2A RUN Domain-Containing Protein 2A RUN Domain Containing 2A Sorting Nexin-29 FLJ12363 A-388D4.1
Location (GRCh37)
16:12070602-12668146 UCSC Genome Browser
Location (GRCh38)
16:11976745-12574289
UCSC Genome Browser Search in Marker Scope
Host gene
SNX29
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_SNX29_0010500 Intron-Intron chr16:12208657-12210316 chr16:12114800-12116459 1660 nt 0.4675
hsa_SNX29_0010600 Intron-Exon-Intron chr16:12209511-12293540 chr16:12115654-12199683 147 nt 0.5034
hsa_SNX29_0010700 Intron-Exon-Intron chr16:12209677-12293540 chr16:12115820-12199683 64 nt 0.5781
hsa_SNX29_0010800 Intron-Intron chr16:12211890-12212228 chr16:12118033-12118371 339 nt 0.4307
hsa_SNX29_0010900 Intron-Exon-Intron chr16:12216089-12223615 chr16:12122232-12129758 250 nt 0.4640
hsa_SNX29_0011000 Intron-Intron chr16:12220229-12220426 chr16:12126372-12126569 198 nt 0.4646
hsa_SNX29_0011800 Exon-Exon chr16:12220490-12229560 chr16:12126633-12135703 193 nt 0.6062
hsa_SNX29_0011900 Intron-Exon-Intron chr16:12220490-12232691 chr16:12126633-12138834 328 nt 0.5579
hsa_SNX29_0011400 Intron-Exon-Intron chr16:12220490-12253409 chr16:12126633-12159552 250 nt 0.3920
hsa_SNX29_0011600 Exon-Exon chr16:12220490-12293540 chr16:12126633-12199683 276 nt 0.5580
Showing 131 to 140 of 234 entries
Forensic Context

A study in mice demonstrated that the circSNX29 is expressed at higher levels in embryonic skeletal muscle compared to adult tissue and its expression correlates with myoblast differentiation, where it functions as a sponge for miR-744 to increase Wnt5a and CaMKIId expression [Di Agostino et al. DOI:10.3389/fcell.2020.00389].