Basic Information

Symbol
circSNX29
RNA Class
circRNA
Alias
Sorting Nexin 29 RUNDC2A RUN Domain-Containing Protein 2A RUN Domain Containing 2A Sorting Nexin-29 FLJ12363 A-388D4.1
Location (GRCh37)
16:12070602-12668146 UCSC Genome Browser
Location (GRCh38)
16:11976745-12574289
UCSC Genome Browser Search in Marker Scope
Host gene
SNX29
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_CTD-3037G24.3_0000400 Intron-Intron chr16:12664491-12665359 chr16:12570634-12571502 869 nt 0.5086
hsa_CTD-3037G24.3_0000500 Intron-Intron chr16:12664550-12664716 chr16:12570693-12570859 167 nt 0.4850
hsa_CTD-3037G24.3_0000600 Intron-Intron chr16:12664834-12665260 chr16:12570977-12571403 427 nt 0.5199
hsa_CTD-3037G24.3_0000700 Intron-Intron chr16:12664931-12665260 chr16:12571074-12571403 330 nt 0.5152
hsa_CTD-3037G24.4_0000100 Intergenic-Exon chr16:12644283-12650396 chr16:12550426-12556539 102 nt 0.5098
hsa_CTD-3037G24.4_0000200 Intergenic-Exon chr16:12644538-12650396 chr16:12550681-12556539 250 nt 0.3600
hsa_CTD-3037G24.4_0000300 Intergenic-Exon chr16:12646246-12650396 chr16:12552389-12556539 299 nt 0.5518
hsa_RP11-276H1.3_0000100 Intergenic-Exon-Intergenic chr16:12155403-12223499 chr16:12061546-12129642 177 nt 0.6215
hsa_SNX29_0000300 Intron-Intron chr16:12072718-12076838 chr16:11978861-11982981 250 nt 0.2840
hsa_SNX29_0000700 Intron-Exon-Intron chr16:12077423-12096900 chr16:11983566-12003043 260 nt 0.5000
Showing 31 to 40 of 234 entries
Forensic Context

A study in mice demonstrated that the circSNX29 is expressed at higher levels in embryonic skeletal muscle compared to adult tissue and its expression correlates with myoblast differentiation, where it functions as a sponge for miR-744 to increase Wnt5a and CaMKIId expression [Di Agostino et al. DOI:10.3389/fcell.2020.00389].