Basic Information

Symbol
circSPTA1
RNA Class
circRNA
Alias
Spectrin Alpha, Erythrocytic 1 EL2 Spectrin Alpha Chain, Erythrocytic 1 Erythroid Alpha-Spectrin Elliptocytosis 2 SPTA Spectrin, Alpha, Erythrocytic 1 (Elliptocytosis 2) Spectrin Alpha Chain, Erythrocyte Alpha-I Spectrin SPH3 HPP HS3
Location (GRCh37)
1:158580496-158656382 UCSC Genome Browser
Location (GRCh38)
1:158610706-158686592
UCSC Genome Browser Search in Marker Scope
Host gene
SPTA1
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_SPTA1_0007700 Exon-Exon chr1:158618299-158639576 chr1:158648509-158669786 92 nt 0.5435
hsa_SPTA1_0007800 Exon-Exon chr1:158618299-158644465 chr1:158648509-158674675 151 nt 0.5430
hsa_SPTA1_0007900 Exon-Exon chr1:158618299-158656327 chr1:158648509-158686537 358 nt 0.5196
hsa_SPTA1_0008000 Intron-Exon-Intron chr1:158619646-158621386 chr1:158649856-158651596 138 nt 0.5362
hsa_SPTA1_0008100 Exon-Exon chr1:158619646-158627484 chr1:158649856-158657694 92 nt 0.5435
hsa_SPTA1_0008200 Intron-Exon-Intron chr1:158619784-158622443 chr1:158649994-158652653 1662 nt 0.3845
hsa_SPTA1_0008300 Intron-Exon-Intron chr1:158620347-158624538 chr1:158650557-158654748 1389 nt 0.4168
hsa_SPTA1_0008500 Exon-Exon chr1:158621157-158622357 chr1:158651367-158652567 102 nt 0.4412
hsa_SPTA1_0008400 Exon-Exon chr1:158621157-158622443 chr1:158651367-158652653 289 nt 0.4394
hsa_SPTA1_0008600 Exon-Exon chr1:158621157-158623215 chr1:158651367-158653425 254 nt 0.5197
Showing 81 to 90 of 175 entries
Forensic Context

A study in mice demonstrated that the circSPTA1 is an example of a circular RNA that is abundant and functional in the nervous system [Wang et al. DOI:10.4103/1673-5374.308100].