Basic Information
Symbol
circATRNL1
RNA Class
circRNA
Alias
Attractin Like 1
KIAA0534
ALP
Attractin-Like Protein 1
FLJ45344
Attractin-Like 1
BA338L11.1
BA454H24.1
Location (GRCh37)
10:116730127-117704795
UCSC Genome Browser
Location (GRCh38)
10:114970368-115945284
Host gene
ATRNL1
Host category
mRNA
Forensic tag(s)
Postmortem interval inference
Sudden death from CNS diseases
External database
Transcripts
| ID | Type | Location (GRCh37) | Location (GRCh38) | Length | GC content |
|---|---|---|---|---|---|
| hsa_ATRNL1_0000900 | Intron-Exon-Intron | chr10:116873772-116889297 | chr10:115114009-115129535 | 250 nt | 0.3280 |
| hsa_ATRNL1_0001300 | Intron-Exon | chr10:116873772-116931050 | chr10:115114009-115171292 | 250 nt | 0.2840 |
| hsa_ATRNL1_0002900 | Exon-Exon | chr10:116879949-116887485 | chr10:115120185-115127721 | 327 nt | 0.3425 |
| hsa_ATRNL1_0003000 | Exon-Exon | chr10:116879949-116889297 | chr10:115120185-115129535 | 536 nt | 0.3675 |
| hsa_ATRNL1_0003100 | Exon-Exon | chr10:116879949-116919975 | chr10:115120185-115160214 | 711 nt | 0.3755 |
| hsa_ATRNL1_0003200 | Exon-Exon | chr10:116879949-116925405 | chr10:115120185-115165645 | 799 nt | 0.3780 |
| hsa_ATRNL1_0003300 | Exon-Exon | chr10:116879949-116931050 | chr10:115120185-115171292 | 1055 nt | 0.3744 |
| hsa_ATRNL1_0003400 | Intron-Exon-Intron | chr10:116879949-116933204 | chr10:115120185-115173448 | 250 nt | 0.2320 |
| hsa_ATRNL1_0003500 | Exon-Exon | chr10:116879949-116975638 | chr10:115120185-115215880 | 1239 nt | 0.3721 |
| hsa_ATRNL1_0007100 | Exon-Exon | chr10:116887357-116975638 | chr10:115127593-115215880 | 1041 nt | 0.3814 |
Showing 1 to 10 of 322 entries
Forensic Context
A study in mice demonstrated that the circATRNL1 exhibits good postmortem stability in cardiac tissue, maintaining detectable levels for up to eight days after death, which supports its potential utility for postmortem interval estimation [Tian et al. DOI:10.3390/molecules26041155]. A study in human traumatic brain injury (TBI) patients identified the circATRNL1 as a top down-regulated circular RNA (fold change 0.35) in brain injury tissues, a finding validated by qRT-PCR [Li et al. DOI:10.3389/fneur.2022.1086553].