Basic Information

Symbol
circATRNL1
RNA Class
circRNA
Alias
Attractin Like 1 KIAA0534 ALP Attractin-Like Protein 1 FLJ45344 Attractin-Like 1 BA338L11.1 BA454H24.1
Location (GRCh37)
10:116730127-117704795 UCSC Genome Browser
Location (GRCh38)
10:114970368-115945284
UCSC Genome Browser Search in Marker Scope
Host gene
ATRNL1
Host category
mRNA
Forensic tag(s)
Postmortem interval inference Sudden death from CNS diseases
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_ATRNL1_0010600 Intron-Exon-Intron chr10:116930795-116980261 chr10:115171037-115220503 136 nt 0.4191
hsa_ATRNL1_0010100 Exon-Exon chr10:116930795-117001514 chr10:115171037-115241725 595 nt 0.3681
hsa_ATRNL1_0010200 Exon-Exon chr10:116930795-117027921 chr10:115171037-115268444 1008 nt 0.3750
hsa_ATRNL1_0010300 Exon-Exon chr10:116930795-117045907 chr10:115171037-115286397 1323 nt 0.3757
hsa_ATRNL1_0010400 Exon-Exon chr10:116930795-117061553 chr10:115171037-115302043 1726 nt 0.3940
hsa_ATRNL1_0010700 Exon-Exon chr10:116930795-117075246 chr10:115171037-115315736 408 nt 0.4559
hsa_ATRNL1_0010800 Exon-Exon chr10:116930795-117093929 chr10:115171037-115334419 144 nt 0.4236
hsa_chr10_0112400 Intergenic-Intergenic chr10:116932517-116932800 chr10:115172761-115173044 284 nt 0.3803
hsa_ATRNL1_0010900 Intron-Exon-Intron chr10:116933150-117075246 chr10:115173394-115315736 274 nt 0.4161
hsa_ATRNL1_0011000 Intron-Intron chr10:116942446-116942622 chr10:115182694-115182870 177 nt 0.3333
Showing 141 to 150 of 322 entries
Forensic Context

A study in mice demonstrated that the circATRNL1 exhibits good postmortem stability in cardiac tissue, maintaining detectable levels for up to eight days after death, which supports its potential utility for postmortem interval estimation [Tian et al. DOI:10.3390/molecules26041155]. A study in human traumatic brain injury (TBI) patients identified the circATRNL1 as a top down-regulated circular RNA (fold change 0.35) in brain injury tissues, a finding validated by qRT-PCR [Li et al. DOI:10.3389/fneur.2022.1086553].