Basic Information
Symbol
circTMEM56
RNA Class
circRNA
Alias
TLCD4-RWDD3 Readthrough
TMEM56-RWDD3 Readthrough
TMEM56-RWDD3
TMEM56-RWDD3 Protein
Location (GRCh37)
1:95583013-95696550
UCSC Genome Browser
Location (GRCh38)
1:95117457-95230994
Host gene
TMEM56
Host category
mRNA
Forensic tag(s)
Sudden cardiac death diagnosis
External database
Transcripts
| ID | Type | Location (GRCh37) | Location (GRCh38) | Length | GC content |
|---|---|---|---|---|---|
| hsa_TMEM56_0000400 | Intron-Exon-Intron | chr1:95586611-95602346 | chr1:95121055-95136790 | 104 nt | 0.4231 |
| hsa_TMEM56_0000500 | Exon-Exon | chr1:95586611-95616975 | chr1:95121055-95151419 | 284 nt | 0.3979 |
| hsa_TMEM56_0000300 | Intron-Exon-Intron | chr1:95586611-95626705 | chr1:95121055-95161149 | 250 nt | 0.3440 |
| hsa_chr1_1154500 | Intergenic-Intergenic | chr1:95588664-95588976 | chr1:95123108-95123420 | 313 nt | 0.3770 |
| hsa_TMEM56_0000600 | Intron-Exon | chr1:95603831-95657237 | chr1:95138275-95191681 | 132 nt | 0.4015 |
| hsa_TMEM56_0000700 | Intron-Exon | chr1:95606229-95657237 | chr1:95140673-95191681 | 165 nt | 0.3879 |
| hsa_TMEM56_0000800 | Intron-Exon | chr1:95606229-95658802 | chr1:95140673-95193246 | 70 nt | 0.4714 |
| hsa_TMEM56_0000900 | Exon-Exon | chr1:95609447-95657235 | chr1:95143891-95191679 | 181 nt | 0.3425 |
| hsa_TMEM56_0001000 | Exon-Exon | chr1:95609447-95657237 | chr1:95143891-95191681 | 366 nt | 0.4098 |
| hsa_TMEM56_0001100 | Exon-Exon | chr1:95609447-95657289 | chr1:95143891-95191733 | 181 nt | 0.3425 |
Showing 151 to 160 of 166 entries
Forensic Context
A study in humans demonstrated that the circTMEM56 is significantly lower in the serum of patients with hypertrophic cardiomyopathy (HCM) compared to healthy controls, showing a negative correlation with the severity of left ventricular obstruction in obstructive HCM and achieving an area under the curve (AUC) of 0.738 for diagnostic potential [Tian et al. DOI:10.3390/molecules26041155].