Forensic RNA Knowledge Base

Basic Information

Symbol

circUBE3D

RNA Class

circRNA

Alias

Ubiquitin Protein Ligase E3D H10BH C6orf157 YJR141W UBE2CBP Ubiquitin-Conjugating Enzyme E2C-Binding Protein UBCH10 Binding Protein With A Hect-Like Domain UbcH10-Binding Protein With A HECT-Like Domain HECT-Type E3 Ubiquitin Transferase E3D E3 Ubiquitin-Protein Ligase E3D DKFZp434A1520 Ubiquitin-Conjugating Enzyme E2C Binding Protein Chromosome 6 Open Reading Frame 157 EC 2.3.2.26

Location (GRCh37)

6:83667031-83754378 UCSC Genome Browser

Location (GRCh38)

6:82957312-83044659

UCSC Genome Browser Search in Marker Scope

Host gene

UBE3D

Host category

mRNA

Forensic tag(s)

Sudden death from CNS diseases

External database

circbank

Transcripts

ID	Type	Location (GRCh37)	Location (GRCh38)	Length	GC content
hsa_UBE3D_0001900	Exon-Exon	chr6:83667031-83754378	chr6:82957312-83044659	784 nt	0.4413

Forensic Context

A study in humans identified 736 differentially expressed circRNAs in peripheral blood from ischemic stroke patients, with the circUBE3D being down-regulated (log2FC=-3.23452) and its host gene identified as UBE3D [Wei et al. DOI:10.1186/s12883-021-02397-0].