Basic Information

Symbol
circCHD2
RNA Class
circRNA
Alias
Chromodomain Helicase DNA Binding Protein 2 Chromodomain-Helicase-DNA-Binding Protein 2 ATP-Dependent Helicase CHD2 DKFZp686E01200 DKFZp547I1315 DKFZp781D1727 FLJ38614 CHD-2 EC 3.6.4.- EC 3.6.1 DEE94 EEOC
Location (GRCh37)
15:93428745-93570444 UCSC Genome Browser
Location (GRCh38)
15:92885515-93027214
UCSC Genome Browser Search in Marker Scope
Host gene
CHD2
Host category
mRNA
Forensic tag(s)
Cause of death analysis
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_CHD2_0003000 Exon-Exon chr15:93443551-93498742 chr15:92900321-92955512 2384 nt 0.4421
hsa_CHD2_0003100 Exon-Exon chr15:93443551-93552553 chr15:92900321-93009323 250 nt 0.4400
hsa_CHD2_0006300 Exon-Exon chr15:93444397-93543870 chr15:92901167-93000640 250 nt 0.3240
hsa_CHD2_0010400 Exon-Exon chr15:93467551-93467782 chr15:92924321-92924552 232 nt 0.5259
hsa_CHD2_0010500 Exon-Exon chr15:93467551-93472321 chr15:92924321-92929091 381 nt 0.5066
hsa_CHD2_0010600 Exon-Exon chr15:93467551-93482948 chr15:92924321-92939718 630 nt 0.4873
hsa_CHD2_0010700 Exon-Exon chr15:93467551-93489446 chr15:92924321-92946216 1315 nt 0.4479
hsa_CHD2_0010800 Exon-Exon chr15:93467551-93498742 chr15:92924321-92955512 1747 nt 0.4436
hsa_CHD2_0010900 Exon-Exon chr15:93467551-93499879 chr15:92924321-92956649 1938 nt 0.4453
hsa_CHD2_0011000 Exon-Exon chr15:93467551-93510743 chr15:92924321-92967513 2127 nt 0.4448
Showing 1 to 10 of 472 entries
Forensic Context

A study in humans demonstrated that the circCHD2 was significantly more abundant in CD14+ monocytes from critically ill patients with sepsis due to community-acquired pneumonia compared to healthy subjects. This circular RNA was resistant to RNase R digestion, confirming its circular nature, and its expression was not induced by ex vivo stimulation of healthy monocytes with bacterial components [Khan et al. DOI:10.1186/s13054-020-03146-4].