Basic Information

Symbol
circCHD2
RNA Class
circRNA
Alias
Chromodomain Helicase DNA Binding Protein 2 Chromodomain-Helicase-DNA-Binding Protein 2 ATP-Dependent Helicase CHD2 DKFZp686E01200 DKFZp547I1315 DKFZp781D1727 FLJ38614 CHD-2 EC 3.6.4.- EC 3.6.1 DEE94 EEOC
Location (GRCh37)
15:93428745-93570444 UCSC Genome Browser
Location (GRCh38)
15:92885515-93027214
UCSC Genome Browser Search in Marker Scope
Host gene
CHD2
Host category
mRNA
Forensic tag(s)
Cause of death analysis
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_CHD2_0006600 Exon-Exon chr15:93444397-93540633 chr15:92901167-92997403 250 nt 0.3160
hsa_CHD2_0008500 Exon-Exon chr15:93444414-93524141 chr15:92901184-92980911 250 nt 0.3200
hsa_CHD2_0009200 Exon-Exon chr15:93444459-93498742 chr15:92901229-92955512 286 nt 0.4056
hsa_CHD2_0009300 Exon-Exon chr15:93444459-93524687 chr15:92901229-92981457 137 nt 0.4088
hsa_CHD2_0009400 Exon-Exon chr15:93444459-93536228 chr15:92901229-92992998 71 nt 0.4085
hsa_CHD2_0009500 Intron-Exon-Intron chr15:93444711-93515157 chr15:92901481-92971927 250 nt 0.2960
hsa_CHD2_0010100 Intron-Exon-Intron chr15:93464615-93472321 chr15:92921385-92929091 62 nt 0.5323
hsa_CHD2_0012600 Exon-Exon chr15:93467551-93486298 chr15:92924321-92943068 360 nt 0.4056
hsa_CHD2_0012300 Exon-Exon chr15:93467551-93487745 chr15:92924321-92944515 1091 nt 0.4491
hsa_CHD2_0012400 Exon-Exon chr15:93467551-93489312 chr15:92924321-92946082 1181 nt 0.4488
Showing 131 to 140 of 472 entries
Forensic Context

A study in humans demonstrated that the circCHD2 was significantly more abundant in CD14+ monocytes from critically ill patients with sepsis due to community-acquired pneumonia compared to healthy subjects. This circular RNA was resistant to RNase R digestion, confirming its circular nature, and its expression was not induced by ex vivo stimulation of healthy monocytes with bacterial components [Khan et al. DOI:10.1186/s13054-020-03146-4].