Basic Information

Symbol
circCHD2
RNA Class
circRNA
Alias
Chromodomain Helicase DNA Binding Protein 2 Chromodomain-Helicase-DNA-Binding Protein 2 ATP-Dependent Helicase CHD2 DKFZp686E01200 DKFZp547I1315 DKFZp781D1727 FLJ38614 CHD-2 EC 3.6.4.- EC 3.6.1 DEE94 EEOC
Location (GRCh37)
15:93428745-93570444 UCSC Genome Browser
Location (GRCh38)
15:92885515-93027214
UCSC Genome Browser Search in Marker Scope
Host gene
CHD2
Host category
mRNA
Forensic tag(s)
Cause of death analysis
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_CHD2_0015600 Exon-Exon chr15:93472260-93499879 chr15:92929030-92956649 62 nt 0.5323
hsa_CHD2_0015200 Exon-Exon chr15:93472260-93527730 chr15:92929030-92984500 2856 nt 0.4384
hsa_CHD2_0015700 Intron-Exon-Intron chr15:93472260-93534660 chr15:92929030-92991430 62 nt 0.5323
hsa_CHD2_0015300 Exon-Exon chr15:93472260-93536228 chr15:92929030-92992998 250 nt 0.4080
hsa_CHD2_0015800 Intron-Exon-Intron chr15:93474090-93541851 chr15:92930860-92998621 123 nt 0.5447
hsa_CHD2_0016900 Exon-Exon chr15:93480748-93487745 chr15:92937518-92944515 710 nt 0.4183
hsa_CHD2_0017200 Exon-Exon chr15:93480748-93496803 chr15:92937518-92953573 114 nt 0.4474
hsa_CHD2_0017300 Exon-Exon chr15:93480748-93498742 chr15:92937518-92955512 114 nt 0.4474
hsa_CHD2_0017400 Exon-Exon chr15:93480748-93510743 chr15:92937518-92967513 195 nt 0.4308
hsa_CHD2_0017500 Exon-Exon chr15:93480748-93515647 chr15:92937518-92972417 249 nt 0.4578
Showing 161 to 170 of 472 entries
Forensic Context

A study in humans demonstrated that the circCHD2 was significantly more abundant in CD14+ monocytes from critically ill patients with sepsis due to community-acquired pneumonia compared to healthy subjects. This circular RNA was resistant to RNase R digestion, confirming its circular nature, and its expression was not induced by ex vivo stimulation of healthy monocytes with bacterial components [Khan et al. DOI:10.1186/s13054-020-03146-4].