Basic Information

Symbol
circCHD2
RNA Class
circRNA
Alias
Chromodomain Helicase DNA Binding Protein 2 Chromodomain-Helicase-DNA-Binding Protein 2 ATP-Dependent Helicase CHD2 DKFZp686E01200 DKFZp547I1315 DKFZp781D1727 FLJ38614 CHD-2 EC 3.6.4.- EC 3.6.1 DEE94 EEOC
Location (GRCh37)
15:93428745-93570444 UCSC Genome Browser
Location (GRCh38)
15:92885515-93027214
UCSC Genome Browser Search in Marker Scope
Host gene
CHD2
Host category
mRNA
Forensic tag(s)
Cause of death analysis
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_CHD2_0019200 Exon-Exon chr15:93482808-93498742 chr15:92939578-92955512 307 nt 0.4235
hsa_CHD2_0018700 Exon-Exon chr15:93482808-93499879 chr15:92939578-92956649 1449 nt 0.4286
hsa_CHD2_0019300 Exon-Exon chr15:93482808-93510743 chr15:92939578-92967513 141 nt 0.4610
hsa_CHD2_0018200 Exon-Exon chr15:93482808-93521613 chr15:92939578-92978383 2176 nt 0.4366
hsa_CHD2_0018300 Exon-Exon chr15:93482808-93524687 chr15:92939578-92981457 2515 nt 0.4350
hsa_CHD2_0018400 Exon-Exon chr15:93482808-93527730 chr15:92939578-92984500 2686 nt 0.4356
hsa_CHD2_0018500 Exon-Exon chr15:93482808-93536228 chr15:92939578-92992998 250 nt 0.3880
hsa_chr15_0374600 Intergenic-Intergenic chr15:93482822-93496721 chr15:92939592-92953491 1072 nt 0.4272
hsa_CHD2_0019700 Exon-Exon chr15:93485052-93486298 chr15:92941822-92943068 134 nt 0.3657
hsa_CHD2_0019900 Exon-Exon chr15:93485052-93510743 chr15:92941822-92967513 134 nt 0.3657
Showing 181 to 190 of 472 entries
Forensic Context

A study in humans demonstrated that the circCHD2 was significantly more abundant in CD14+ monocytes from critically ill patients with sepsis due to community-acquired pneumonia compared to healthy subjects. This circular RNA was resistant to RNase R digestion, confirming its circular nature, and its expression was not induced by ex vivo stimulation of healthy monocytes with bacterial components [Khan et al. DOI:10.1186/s13054-020-03146-4].