Basic Information

Symbol
circCHD2
RNA Class
circRNA
Alias
Chromodomain Helicase DNA Binding Protein 2 Chromodomain-Helicase-DNA-Binding Protein 2 ATP-Dependent Helicase CHD2 DKFZp686E01200 DKFZp547I1315 DKFZp781D1727 FLJ38614 CHD-2 EC 3.6.4.- EC 3.6.1 DEE94 EEOC
Location (GRCh37)
15:93428745-93570444 UCSC Genome Browser
Location (GRCh38)
15:92885515-93027214
UCSC Genome Browser Search in Marker Scope
Host gene
CHD2
Host category
mRNA
Forensic tag(s)
Cause of death analysis
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_CHD2_0011100 Exon-Exon chr15:93467551-93518180 chr15:92924321-92974950 2515 nt 0.4425
hsa_CHD2_0011200 Exon-Exon chr15:93467551-93528903 chr15:92924321-92985673 250 nt 0.4440
hsa_CHD2_0011300 Exon-Exon chr15:93467551-93541851 chr15:92924321-92998621 250 nt 0.4440
hsa_CHD2_0011400 Exon-Exon chr15:93467551-93547981 chr15:92924321-93004751 250 nt 0.4160
hsa_CHD2_0013800 Exon-Exon chr15:93470474-93470560 chr15:92927244-92927330 87 nt 0.4368
hsa_CHD2_0013900 Exon-Exon chr15:93470474-93472321 chr15:92927244-92929091 149 nt 0.4765
hsa_CHD2_0014000 Exon-Exon chr15:93470474-93521613 chr15:92927244-92978383 2433 nt 0.4398
hsa_CHD2_0015900 Exon-Exon chr15:93480748-93482948 chr15:92937518-92939718 249 nt 0.4578
hsa_CHD2_0016000 Exon-Exon chr15:93480748-93485185 chr15:92937518-92941955 383 nt 0.4256
hsa_CHD2_0016100 Exon-Exon chr15:93480748-93492306 chr15:92937518-92949076 1059 nt 0.4268
Showing 11 to 20 of 472 entries
Forensic Context

A study in humans demonstrated that the circCHD2 was significantly more abundant in CD14+ monocytes from critically ill patients with sepsis due to community-acquired pneumonia compared to healthy subjects. This circular RNA was resistant to RNase R digestion, confirming its circular nature, and its expression was not induced by ex vivo stimulation of healthy monocytes with bacterial components [Khan et al. DOI:10.1186/s13054-020-03146-4].