Basic Information

Symbol
circCHD2
RNA Class
circRNA
Alias
Chromodomain Helicase DNA Binding Protein 2 Chromodomain-Helicase-DNA-Binding Protein 2 ATP-Dependent Helicase CHD2 DKFZp686E01200 DKFZp547I1315 DKFZp781D1727 FLJ38614 CHD-2 EC 3.6.4.- EC 3.6.1 DEE94 EEOC
Location (GRCh37)
15:93428745-93570444 UCSC Genome Browser
Location (GRCh38)
15:92885515-93027214
UCSC Genome Browser Search in Marker Scope
Host gene
CHD2
Host category
mRNA
Forensic tag(s)
Cause of death analysis
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_CHD2_0020000 Exon-Exon chr15:93485052-93518180 chr15:92941822-92974950 134 nt 0.3657
hsa_CHD2_0020300 Exon-Exon chr15:93486073-93522513 chr15:92942843-92979283 2050 nt 0.4420
hsa_CHD2_0021200 Exon-Exon chr15:93487645-93492306 chr15:92944415-92949076 107 nt 0.3738
hsa_CHD2_0021300 Exon-Exon chr15:93487645-93496803 chr15:92944415-92953573 217 nt 0.4562
hsa_CHD2_0021400 Exon-Exon chr15:93487645-93498742 chr15:92944415-92955512 533 nt 0.4184
hsa_CHD2_0021500 Exon-Exon chr15:93487645-93499879 chr15:92944415-92956649 197 nt 0.4619
hsa_CHD2_0021600 Exon-Exon chr15:93487645-93515157 chr15:92944415-92971927 163 nt 0.4110
hsa_CHD2_0021700 Intron-Exon-Intron chr15:93487645-93515293 chr15:92944415-92972063 419 nt 0.4224
hsa_CHD2_0021800 Exon-Exon chr15:93487645-93515647 chr15:92944415-92972417 299 nt 0.3913
hsa_CHD2_0021900 Exon-Exon chr15:93487645-93518180 chr15:92944415-92974950 173 nt 0.4277
Showing 191 to 200 of 472 entries
Forensic Context

A study in humans demonstrated that the circCHD2 was significantly more abundant in CD14+ monocytes from critically ill patients with sepsis due to community-acquired pneumonia compared to healthy subjects. This circular RNA was resistant to RNase R digestion, confirming its circular nature, and its expression was not induced by ex vivo stimulation of healthy monocytes with bacterial components [Khan et al. DOI:10.1186/s13054-020-03146-4].